Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ETT48_RS08185 Genome accession   NZ_CP035451
Coordinates   1584161..1584640 (-) Length   159 a.a.
NCBI ID   WP_229020935.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm230     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1579161..1589640
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT48_RS08165 (ETT48_08160) - 1579331..1579936 (-) 606 WP_002982799.1 response regulator transcription factor -
  ETT48_RS08170 (ETT48_08165) - 1579917..1581479 (-) 1563 WP_053308605.1 SalK -
  ETT48_RS08175 (ETT48_08170) - 1581519..1583425 (-) 1907 Protein_1522 FtsX-like permease family protein -
  ETT48_RS08180 (ETT48_08175) - 1583427..1584164 (-) 738 WP_063633050.1 ABC transporter ATP-binding protein -
  ETT48_RS08185 (ETT48_08180) rcrQ 1584161..1584640 (-) 480 WP_229020935.1 ATP-binding cassette domain-containing protein Regulator
  ETT48_RS08190 (ETT48_08185) - 1584696..1586321 (-) 1626 WP_063633049.1 DUF4135 domain-containing protein -
  ETT48_RS08195 (ETT48_08190) - 1586403..1586558 (-) 156 WP_002982773.1 type A2 lanthipeptide -
  ETT48_RS08200 (ETT48_08195) lacG 1587061..1588467 (-) 1407 WP_002992329.1 6-phospho-beta-galactosidase -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18596.26 Da        Isoelectric Point: 6.9597

>NTDB_id=303207 ETT48_RS08185 WP_229020935.1 1584161..1584640(-) (rcrQ) [Streptococcus pyogenes strain emm230]
MFDGDVMYNISLGRESVTEKQVIETCKRVSLYEDIRSMPMKFHTPLFRDNPSLSGGQKQRISLARELVTTPRILVLDEPT
SALDVKTERIIQKNVEALHCTRVLVTHRFNTVEKADKILIMDNGKIIDYGSHHCLYKNNEYYRDLYDSYMNKYQEEEAK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=303207 ETT48_RS08185 WP_229020935.1 1584161..1584640(-) (rcrQ) [Streptococcus pyogenes strain emm230]
ATATTTGATGGGGATGTGATGTATAACATTTCGCTAGGAAGAGAATCTGTTACAGAAAAACAAGTTATTGAAACCTGTAA
AAGGGTATCACTATATGAGGATATCAGGAGTATGCCAATGAAGTTTCATACCCCACTTTTTCGAGACAATCCATCACTAT
CTGGGGGGCAAAAACAACGAATTTCTCTAGCAAGAGAGTTAGTAACTACCCCTAGAATCTTAGTTCTTGATGAACCTACA
TCAGCTTTAGATGTAAAAACTGAAAGAATAATCCAAAAAAATGTTGAGGCTTTACATTGTACGAGGGTTTTGGTTACCCA
TAGATTTAATACAGTTGAAAAAGCTGATAAGATTTTAATAATGGATAATGGGAAAATTATTGACTATGGTAGTCATCATT
GTTTATATAAAAATAATGAGTACTATCGTGATTTATATGATTCGTATATGAATAAATATCAGGAGGAAGAGGCAAAATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(31-81)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.125

100

0.384

Multiple sequence alignment