Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   ETT55_RS07640 Genome accession   NZ_CP035444
Coordinates   1519423..1519902 (-) Length   159 a.a.
NCBI ID   WP_247442440.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm90.5     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 1514423..1524902
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT55_RS07620 (ETT55_07610) - 1514592..1515197 (-) 606 WP_002982799.1 response regulator transcription factor -
  ETT55_RS07625 (ETT55_07615) - 1515178..1516740 (-) 1563 WP_030126269.1 ATP-binding protein -
  ETT55_RS07630 (ETT55_07620) - 1516780..1518687 (-) 1908 WP_111718000.1 FtsX-like permease family protein -
  ETT55_RS07635 (ETT55_07625) - 1518689..1519426 (-) 738 WP_030126267.1 ABC transporter ATP-binding protein -
  ETT55_RS07640 (ETT55_07630) rcrQ 1519423..1519902 (-) 480 WP_247442440.1 ABC transporter ATP-binding protein Regulator
  ETT55_RS07645 (ETT55_07635) - 1519958..1521583 (-) 1626 WP_136022261.1 DUF4135 domain-containing protein -
  ETT55_RS07650 (ETT55_07640) - 1521666..1521821 (-) 156 WP_002982773.1 type A2 lanthipeptide -
  ETT55_RS07655 (ETT55_07645) lacG 1522324..1523730 (-) 1407 WP_111689672.1 6-phospho-beta-galactosidase -

Sequence


Protein


Download         Length: 159 a.a.        Molecular weight: 18628.39 Da        Isoelectric Point: 6.6377

>NTDB_id=302540 ETT55_RS07640 WP_247442440.1 1519423..1519902(-) (rcrQ) [Streptococcus pyogenes strain emm90.5]
MFDGDVMYNILLGRESVTEKQVIEICKRVSLYEDIRSMPMKFHTPLFRDNPSLSGGQKQRISLARELVTTPRILVLDEPT
SALDVKTERIIQKNVEALHCTRVLVTHRLNTVEKADKILIMDNGKIIDYGSHHCLYKNNEYYRDLYDSYMNNYQEEEIK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=302540 ETT55_RS07640 WP_247442440.1 1519423..1519902(-) (rcrQ) [Streptococcus pyogenes strain emm90.5]
ATATTTGATGGGGATGTGATGTATAACATTTTGCTAGGAAGAGAATCTGTTACAGAAAAACAAGTTATTGAAATCTGTAA
AAGGGTATCACTATATGAGGATATCAGGAGTATGCCAATGAAGTTTCATACCCCACTTTTTCGAGACAATCCATCACTAT
CTGGGGGGCAAAAACAACGAATTTCTCTAGCAAGAGAGTTAGTAACTACCCCTAGAATCTTAGTTCTTGATGAACCTACA
TCAGCTTTAGATGTAAAAACTGAAAGAATAATCCAAAAAAATGTTGAGGCTTTACATTGTACGAGGGTTTTGGTTACCCA
TAGACTTAATACAGTTGAAAAAGCTGATAAGATTTTAATAATGGATAATGGGAAAATTATTGACTATGGTAGTCATCATT
GTTTATATAAAAATAATGAGTACTATCGTGATTTATATGATTCGTACATGAACAACTATCAGGAGGAAGAGATAAAATGA

Domains


Predicted by InterProScan.

(21-81)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

39.333

94.34

0.371

  comA Streptococcus pneumoniae TIGR4

38.926

93.711

0.365

  comA Streptococcus pneumoniae Rx1

38.926

93.711

0.365

  comA Streptococcus mitis NCTC 12261

38.926

93.711

0.365

  comA Streptococcus pneumoniae R6

38.926

93.711

0.365

  comA Streptococcus mitis SK321

38.926

93.711

0.365

  comA Streptococcus pneumoniae D39

38.926

93.711

0.365


Multiple sequence alignment