Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   EGCR1_RS13830 Genome accession   NZ_CP030932
Coordinates   2819714..2821546 (+) Length   610 a.a.
NCBI ID   WP_114525303.1    Uniprot ID   -
Organism   Enterococcus gilvus strain CR1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2814714..2826546
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGCR1_RS13815 (EGCR1_13820) - 2814819..2816642 (+) 1824 WP_010782002.1 APC family permease -
  EGCR1_RS13820 (EGCR1_13825) - 2816872..2817318 (+) 447 WP_010782001.1 MarR family winged helix-turn-helix transcriptional regulator -
  EGCR1_RS13825 (EGCR1_13830) - 2817318..2819699 (+) 2382 WP_010782000.1 ABC transporter ATP-binding protein -
  EGCR1_RS13830 (EGCR1_13835) rcrQ 2819714..2821546 (+) 1833 WP_114525303.1 ABC transporter ATP-binding protein Regulator
  EGCR1_RS13835 (EGCR1_13840) - 2821614..2822198 (-) 585 WP_240318372.1 hypothetical protein -
  EGCR1_RS13840 (EGCR1_13845) - 2822188..2823195 (-) 1008 WP_114525305.1 DUF4947 domain-containing protein -
  EGCR1_RS13845 (EGCR1_13850) - 2823467..2824105 (+) 639 WP_205242201.1 L-fuculose-phosphate aldolase -
  EGCR1_RS13850 (EGCR1_13855) - 2824138..2825178 (+) 1041 WP_114525307.1 2-hydroxyacid dehydrogenase -
  EGCR1_RS13855 (EGCR1_13860) - 2825223..2826212 (-) 990 WP_010781994.1 transketolase family protein -

Sequence

Protein


Download         Length: 610 a.a.        Molecular weight: 67696.26 Da        Isoelectric Point: 6.3342

>NTDB_id=302540 EGCR1_RS13830 WP_114525303.1 2819714..2821546(+) (rcrQ) [Enterococcus gilvus strain CR1]
MAEQKQNRPRGGGHGPVGAPVEKAKDFKGTIKKLVSYLGAYKIGVFFVMIFAIASTIFNIWGPKILSKAITELFNGLIKK
YQGTGDINFDKIGGILLFMLGLYVAASVFGIIQGWIMSTISQKITYRMRKEISEKINRMPMNYFESRTTGEVLSRITNDV
DTLGQSLNQSLTQLITSTFTIIGVIVMMLSISVKMTGVAILIVPISLILIMIVVKNSQKYFKTQQEYLGVINGKVEETIG
GYTIVRLFNDEENSLTEFKEQNDILFKSAWKSQFLSGLMQPIMNFVGNLGYVGVAIVGGIMAYNGSITVGDIQAFIQYVR
NLTQPIAQLAQVSNMLQSMAAAAERVFEFLSEEEEDQLAENPVQIDKAKGMVDFEHVQFGYTPDKIVIQDFTSHVDPGQT
VAIVGPTGAGKTTMVKLLMRFYDVNSGAIKIDGHNIKDFNRADLRKNIGMVLQDTWLFKGTIMDNLRYGRLDATDEEVYA
AAKAAHVDHFIKTLPGGYDMELNEESSNISQGQKQLLTIARAILADKPILILDEATSSVDTRTEGLIQEAMNNLMKGRTS
FVIAHRLSTIKDADKILYMQNGDIKEQGSHEELLAKNGLYAALYNSQFEE

Nucleotide


Download         Length: 1833 bp        

>NTDB_id=302540 EGCR1_RS13830 WP_114525303.1 2819714..2821546(+) (rcrQ) [Enterococcus gilvus strain CR1]
ATGGCAGAACAAAAACAAAATCGCCCTCGTGGTGGCGGACATGGACCTGTGGGCGCACCAGTAGAAAAAGCCAAAGATTT
CAAAGGAACCATTAAGAAATTAGTCTCTTATCTGGGTGCTTATAAAATCGGTGTGTTCTTTGTAATGATTTTCGCGATTG
CTTCAACGATATTTAATATTTGGGGCCCGAAAATCTTATCAAAGGCGATTACTGAATTATTCAATGGATTAATCAAAAAA
TATCAAGGAACGGGCGATATCAATTTTGATAAAATCGGCGGTATCCTATTATTCATGCTAGGTCTTTACGTGGCAGCTTC
TGTATTTGGGATCATCCAAGGATGGATCATGTCAACGATCTCGCAAAAGATCACGTACCGGATGCGAAAAGAAATCTCTG
AAAAAATCAATCGGATGCCGATGAATTATTTCGAGAGCCGTACTACGGGTGAAGTGTTGTCTCGCATCACAAACGACGTG
GATACGCTCGGACAATCCTTGAACCAAAGTTTGACACAACTGATCACTTCAACCTTCACGATCATTGGGGTTATCGTCAT
GATGCTTTCGATTTCAGTGAAGATGACGGGTGTGGCGATCTTGATCGTACCGATCTCACTGATTTTGATCATGATCGTTG
TAAAAAATTCGCAAAAATACTTCAAGACACAACAAGAATACCTTGGTGTGATCAACGGAAAAGTAGAAGAAACCATTGGC
GGCTACACCATCGTTCGTTTGTTCAATGACGAAGAAAACTCGTTGACTGAATTTAAGGAACAAAACGATATCTTATTCAA
GTCAGCATGGAAATCACAATTTCTTTCTGGATTGATGCAGCCGATCATGAACTTTGTCGGTAACTTAGGGTATGTTGGCG
TGGCGATCGTCGGCGGGATCATGGCGTATAATGGTTCGATCACCGTTGGGGATATCCAGGCGTTTATTCAATACGTTCGT
AATTTGACACAACCAATTGCACAATTGGCCCAAGTATCAAATATGCTGCAATCAATGGCTGCAGCGGCTGAACGAGTCTT
TGAATTCTTATCTGAAGAGGAAGAAGATCAACTGGCTGAAAATCCTGTCCAAATTGACAAGGCAAAAGGAATGGTTGATT
TTGAGCATGTTCAATTCGGGTATACACCTGACAAGATCGTCATCCAAGACTTTACGTCTCATGTCGATCCAGGTCAGACA
GTTGCGATCGTTGGTCCAACAGGGGCCGGAAAAACAACCATGGTCAAATTATTGATGCGTTTCTATGATGTCAATTCTGG
TGCGATCAAGATTGATGGGCATAACATCAAAGATTTCAATCGTGCAGATTTACGTAAAAATATTGGGATGGTGTTACAAG
ATACATGGTTGTTCAAAGGAACGATCATGGACAATCTTCGTTACGGTCGTTTAGATGCAACGGATGAAGAAGTTTACGCA
GCAGCAAAAGCGGCTCACGTGGATCATTTCATCAAGACGCTTCCTGGCGGCTATGATATGGAATTGAATGAAGAATCCTC
CAATATTTCCCAAGGCCAAAAGCAATTATTAACAATTGCGCGTGCGATCTTGGCAGATAAACCGATCTTGATTCTGGATG
AGGCTACTTCGTCTGTCGATACACGAACAGAAGGACTGATCCAAGAAGCGATGAACAATTTAATGAAGGGCAGAACCTCC
TTCGTTATCGCTCACCGTTTATCAACGATCAAAGATGCAGACAAGATTCTCTATATGCAAAATGGAGACATCAAGGAGCA
AGGAAGCCACGAAGAACTCTTGGCTAAAAATGGTCTTTACGCGGCATTGTATAATTCGCAGTTTGAGGAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(45-325)

ABC transporter (ABC_tran)

(390-537)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

51.458

95.574

0.492

Multiple sequence alignment