Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | DSN71_RS01305 | Genome accession | NZ_CP030845 |
| Coordinates | 215022..215996 (+) | Length | 324 a.a. |
| NCBI ID | WP_001008574.1 | Uniprot ID | A0AAV3JGK6 |
| Organism | Streptococcus agalactiae strain S73 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 210022..220996
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSN71_RS01260 (DSN71_01260) | - | 210712..211077 (+) | 366 | WP_000285373.1 | DUF1033 family protein | - |
| DSN71_RS01270 (DSN71_01270) | comYA | 211250..212221 (+) | 972 | WP_000250805.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DSN71_RS01275 (DSN71_01275) | comYB | 212115..213158 (+) | 1044 | WP_223295889.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DSN71_RS01280 (DSN71_01280) | comGC/cglC | 213155..213484 (+) | 330 | WP_000793380.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DSN71_RS01285 (DSN71_01285) | comYD | 213459..213872 (+) | 414 | WP_000244261.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| DSN71_RS01290 (DSN71_01290) | comGE | 213844..214143 (+) | 300 | WP_000234804.1 | competence type IV pilus minor pilin ComGE | - |
| DSN71_RS01295 (DSN71_01295) | comGF | 214097..214558 (+) | 462 | WP_001874812.1 | competence type IV pilus minor pilin ComGF | - |
| DSN71_RS01300 (DSN71_01300) | comGG | 214536..214907 (+) | 372 | WP_000601104.1 | competence type IV pilus minor pilin ComGG | - |
| DSN71_RS01305 (DSN71_01305) | comYH | 215022..215996 (+) | 975 | WP_001008574.1 | N-6 DNA methylase | Machinery gene |
| DSN71_RS01310 (DSN71_01310) | - | 216028..217221 (+) | 1194 | WP_000047534.1 | acetate kinase | - |
| DSN71_RS01315 (DSN71_01315) | - | 217373..217579 (+) | 207 | WP_000798241.1 | helix-turn-helix transcriptional regulator | - |
| DSN71_RS10975 (DSN71_01320) | - | 217638..217775 (+) | 138 | WP_001865900.1 | hypothetical protein | - |
| DSN71_RS01325 (DSN71_01325) | - | 217816..218271 (+) | 456 | WP_000905673.1 | hypothetical protein | - |
| DSN71_RS01330 (DSN71_01330) | - | 218340..219005 (+) | 666 | WP_000008113.1 | type II CAAX endopeptidase family protein | - |
| DSN71_RS01335 (DSN71_01335) | proC | 219026..219796 (-) | 771 | WP_001865901.1 | pyrroline-5-carboxylate reductase | - |
| DSN71_RS01340 (DSN71_01340) | pepA | 219866..220933 (-) | 1068 | WP_001281323.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37046.02 Da Isoelectric Point: 4.5224
>NTDB_id=301823 DSN71_RS01305 WP_001008574.1 215022..215996(+) (comYH) [Streptococcus agalactiae strain S73]
MNFEKIETAYELILENIQTIENQLKTHIYDALIEQNSYYLGSSCDLDMVVVNNQKLRQLDLSQEEWRRTFQFIFIKSAQT
EQLQANHQFTPDSIGFILLFLLEELTSQETVDVLEIGSGTGNLAQTLLNNSSKELNYMGIEVDDLLIDLSASIAEIIGSS
AQFIQEDAVRPQILKESDVIISDLPVGYYPNDGIAKRYAVSSSKEHTYAHHLLMEQSLKYLKKDGIAIFLAPENLLTSPQ
SDLLKEWLKGYADVIAVLTLPETIFGSRQNAKSIFVLKKQAEQKPETFVYPLTDLQNRENMANFIENFQKWSRENSHYSK
NMIK
MNFEKIETAYELILENIQTIENQLKTHIYDALIEQNSYYLGSSCDLDMVVVNNQKLRQLDLSQEEWRRTFQFIFIKSAQT
EQLQANHQFTPDSIGFILLFLLEELTSQETVDVLEIGSGTGNLAQTLLNNSSKELNYMGIEVDDLLIDLSASIAEIIGSS
AQFIQEDAVRPQILKESDVIISDLPVGYYPNDGIAKRYAVSSSKEHTYAHHLLMEQSLKYLKKDGIAIFLAPENLLTSPQ
SDLLKEWLKGYADVIAVLTLPETIFGSRQNAKSIFVLKKQAEQKPETFVYPLTDLQNRENMANFIENFQKWSRENSHYSK
NMIK
Nucleotide
Download Length: 975 bp
>NTDB_id=301823 DSN71_RS01305 WP_001008574.1 215022..215996(+) (comYH) [Streptococcus agalactiae strain S73]
ATGAATTTTGAAAAAATTGAGACAGCCTATGAGCTGATTTTAGAAAATATCCAAACGATTGAGAACCAATTAAAAACTCA
TATTTATGATGCCTTAATTGAACAGAACTCTTATTACCTTGGTTCAAGTTGTGATTTAGATATGGTTGTGGTGAATAACC
AAAAATTACGTCAACTTGACTTAAGTCAAGAAGAATGGCGTCGCACTTTCCAGTTCATTTTTATCAAATCTGCGCAAACA
GAGCAATTACAAGCTAATCATCAGTTTACGCCAGATAGTATTGGTTTTATCTTGTTATTTCTTTTGGAAGAATTAACGAG
TCAAGAGACAGTGGATGTCTTGGAAATTGGAAGTGGAACTGGGAATTTAGCTCAGACTCTCCTCAATAACAGCTCGAAAG
AGTTAAATTATATGGGCATTGAAGTTGATGATCTTTTGATTGATCTATCAGCAAGCATTGCTGAAATTATAGGTTCTAGT
GCCCAATTTATCCAAGAGGATGCTGTTAGACCACAAATTTTGAAAGAAAGCGATGTAATCATTAGTGATTTACCAGTTGG
CTATTATCCTAATGATGGTATTGCTAAACGATATGCTGTATCAAGTTCTAAAGAGCACACCTATGCTCACCATCTATTGA
TGGAGCAATCTCTTAAATATTTGAAAAAAGATGGAATCGCTATATTTTTAGCACCCGAAAACCTTTTAACAAGTCCACAA
AGTGATTTGCTGAAGGAGTGGTTAAAAGGATATGCAGATGTCATTGCCGTTTTAACTCTACCAGAAACTATTTTTGGAAG
TCGTCAAAATGCGAAATCTATATTTGTTCTCAAGAAGCAAGCAGAACAAAAACCAGAAACCTTTGTATATCCGCTGACAG
ATTTGCAAAATCGTGAGAATATGGCAAACTTCATTGAAAATTTTCAAAAATGGAGCAGAGAAAATAGTCATTACTCAAAA
AATATGATAAAATAG
ATGAATTTTGAAAAAATTGAGACAGCCTATGAGCTGATTTTAGAAAATATCCAAACGATTGAGAACCAATTAAAAACTCA
TATTTATGATGCCTTAATTGAACAGAACTCTTATTACCTTGGTTCAAGTTGTGATTTAGATATGGTTGTGGTGAATAACC
AAAAATTACGTCAACTTGACTTAAGTCAAGAAGAATGGCGTCGCACTTTCCAGTTCATTTTTATCAAATCTGCGCAAACA
GAGCAATTACAAGCTAATCATCAGTTTACGCCAGATAGTATTGGTTTTATCTTGTTATTTCTTTTGGAAGAATTAACGAG
TCAAGAGACAGTGGATGTCTTGGAAATTGGAAGTGGAACTGGGAATTTAGCTCAGACTCTCCTCAATAACAGCTCGAAAG
AGTTAAATTATATGGGCATTGAAGTTGATGATCTTTTGATTGATCTATCAGCAAGCATTGCTGAAATTATAGGTTCTAGT
GCCCAATTTATCCAAGAGGATGCTGTTAGACCACAAATTTTGAAAGAAAGCGATGTAATCATTAGTGATTTACCAGTTGG
CTATTATCCTAATGATGGTATTGCTAAACGATATGCTGTATCAAGTTCTAAAGAGCACACCTATGCTCACCATCTATTGA
TGGAGCAATCTCTTAAATATTTGAAAAAAGATGGAATCGCTATATTTTTAGCACCCGAAAACCTTTTAACAAGTCCACAA
AGTGATTTGCTGAAGGAGTGGTTAAAAGGATATGCAGATGTCATTGCCGTTTTAACTCTACCAGAAACTATTTTTGGAAG
TCGTCAAAATGCGAAATCTATATTTGTTCTCAAGAAGCAAGCAGAACAAAAACCAGAAACCTTTGTATATCCGCTGACAG
ATTTGCAAAATCGTGAGAATATGGCAAACTTCATTGAAAATTTTCAAAAATGGAGCAGAGAAAATAGTCATTACTCAAAA
AATATGATAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
67.302 |
97.222 |
0.654 |
| comYH | Streptococcus mutans UA140 |
67.302 |
97.222 |
0.654 |