Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ETT70_RS07950 Genome accession   NZ_CP035429
Coordinates   1533629..1534162 (-) Length   177 a.a.
NCBI ID   WP_136112483.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emmNA     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1528629..1539162
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT70_RS07930 (ETT70_07920) - 1528798..1529403 (-) 606 WP_002982799.1 response regulator transcription factor -
  ETT70_RS07935 (ETT70_07925) - 1529384..1530946 (-) 1563 WP_136275863.1 hypothetical protein -
  ETT70_RS07940 (ETT70_07930) - 1530986..1532893 (-) 1908 WP_002982791.1 FtsX-like permease family protein -
  ETT70_RS07945 (ETT70_07935) - 1532895..1533632 (-) 738 WP_136020337.1 ABC transporter ATP-binding protein -
  ETT70_RS07950 (ETT70_07940) rcrQ 1533629..1534162 (-) 534 WP_136112483.1 ABC transporter ATP-binding protein Regulator
  ETT70_RS07955 (ETT70_07945) - 1534164..1535788 (-) 1625 Protein_1472 DUF4135 domain-containing protein -
  ETT70_RS07960 (ETT70_07950) - 1535870..1536025 (-) 156 WP_002982773.1 type A2 lanthipeptide -
  ETT70_RS07965 (ETT70_07955) lacG 1536528..1537934 (-) 1407 WP_002992329.1 6-phospho-beta-galactosidase -

Sequence

Protein


Download         Length: 177 a.a.        Molecular weight: 20587.46 Da        Isoelectric Point: 6.0119

>NTDB_id=301126 ETT70_RS07950 WP_136112483.1 1533629..1534162(-) (rcrQ) [Streptococcus pyogenes strain emmNA]
MDKTDFRNISAFVSQDSPIFDGDVMYNISLGRESVTEKQVIETCKRVSLYEDIMSMPMKFHTPLFRDNPSLSGGQKQRIS
LARELVTTPRILVLDEPTSALDVKTERIIQKNVEALHCTRVLVTHRLNTVEKADKILIMDNGKIIDYGSHHCLYKNNEYY
RDLYDSYMNNYQEEEIK

Nucleotide


Download         Length: 534 bp        

>NTDB_id=301126 ETT70_RS07950 WP_136112483.1 1533629..1534162(-) (rcrQ) [Streptococcus pyogenes strain emmNA]
ATTGATAAAACTGATTTTAGGAATATATCGGCTTTTGTATCTCAAGATTCTCCAATATTTGATGGGGATGTGATGTATAA
CATTTCGCTAGGAAGAGAATCTGTTACAGAAAAACAAGTTATTGAAACTTGTAAAAGGGTATCACTATATGAGGATATCA
TGAGTATGCCAATGAAGTTTCATACCCCACTTTTTCGAGACAATCCATCACTATCTGGGGGGCAAAAACAACGAATTTCT
CTAGCAAGAGAGTTAGTAACTACCCCTAGAATCTTAGTTCTTGATGAACCTACATCAGCTTTAGATGTAAAAACTGAAAG
AATAATCCAAAAAAATGTTGAGGCTTTACATTGTACGAGGGTTTTGGTTACCCATAGACTTAATACAGTTGAAAAAGCTG
ATAAGATTTTAATAATGGATAATGGGAAAATTATTGACTATGGTAGTCATCATTGTTTATATAAAAATAATGAGTACTAT
CGTGATTTATATGATTCGTACATGAACAACTATCAGGAGGAAGAGATAAAATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(5-99)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.095

94.915

0.362