Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ETT71_RS07960 Genome accession   NZ_CP035428
Coordinates   1567967..1568446 (-) Length   159 a.a.
NCBI ID   WP_261763413.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emmSTG866.1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1562967..1573446
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT71_RS07940 (ETT71_07935) - 1563136..1563741 (-) 606 WP_002982799.1 response regulator transcription factor -
  ETT71_RS07945 (ETT71_07940) - 1563722..1565284 (-) 1563 WP_085613656.1 hypothetical protein -
  ETT71_RS07950 (ETT71_07945) - 1565324..1567231 (-) 1908 WP_136093649.1 FtsX-like permease family protein -
  ETT71_RS07955 (ETT71_07950) - 1567233..1567970 (-) 738 WP_063629199.1 ABC transporter ATP-binding protein -
  ETT71_RS07960 (ETT71_07955) rcrQ 1567967..1568446 (-) 480 WP_261763413.1 ATP-binding cassette domain-containing protein Regulator
  ETT71_RS07965 (ETT71_07960) - 1568502..1570127 (-) 1626 WP_136093651.1 DUF4135 domain-containing protein -
  ETT71_RS07970 (ETT71_07965) - 1570211..1570366 (-) 156 WP_002982773.1 type A2 lanthipeptide -
  ETT71_RS07975 (ETT71_07970) lacG 1570872..1572278 (-) 1407 WP_136093652.1 6-phospho-beta-galactosidase -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18518.19 Da        Isoelectric Point: 6.9592

>NTDB_id=301030 ETT71_RS07960 WP_261763413.1 1567967..1568446(-) (rcrQ) [Streptococcus pyogenes strain emmSTG866.1]
MFDGDVMYNISLGRESVTEKQVIETCKRVSLYEDIRSMPMKFHTPLFRDNPSLSGGQKQRISLARELVTTPRILVLDEPT
SALDVKTERIIQKNVEALHCTRVLVTHRLNTVEKADKILIMDNGKIIDYGSHHCLYKNNEYYRDLYDSYMNNYQEEGIK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=301030 ETT71_RS07960 WP_261763413.1 1567967..1568446(-) (rcrQ) [Streptococcus pyogenes strain emmSTG866.1]
ATATTTGATGGGGATGTGATGTATAACATTTCGCTAGGAAGAGAATCTGTTACAGAAAAACAAGTTATTGAAACCTGTAA
AAGGGTATCACTATATGAGGATATCAGGAGTATGCCAATGAAGTTTCATACTCCACTTTTTCGAGATAATCCATCACTAT
CTGGGGGGCAAAAACAACGAATTTCTCTAGCAAGAGAGTTAGTAACTACCCCTAGAATCTTAGTTCTTGATGAACCTACA
TCAGCTTTAGATGTAAAAACTGAAAGAATAATCCAAAAAAATGTTGAGGCTTTACATTGTACGAGGGTTTTGGTTACCCA
TAGACTTAATACAGTTGAAAAAGCTGATAAGATTTTAATAATGGATAATGGGAAAATTATTGACTATGGTAGTCATCATT
GTTTATATAAAAATAATGAGTACTATCGTGATTTATATGATTCGTACATGAACAACTATCAGGAGGAAGGGATAAAATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(31-81)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

39.333

94.34

0.371