Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ETA57_RS11660 Genome accession   NZ_CP035404
Coordinates   2245010..2246833 (+) Length   607 a.a.
NCBI ID   WP_009328116.1    Uniprot ID   -
Organism   Bacillus licheniformis strain SRCM103583     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2240010..2251833
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA57_RS11645 (ETA57_11645) - 2241102..2242676 (+) 1575 WP_009328119.1 alkaline phosphatase family protein -
  ETA57_RS11650 (ETA57_11650) - 2242816..2243289 (+) 474 WP_009328118.1 MarR family transcriptional regulator -
  ETA57_RS11655 (ETA57_11655) rcrP 2243286..2245013 (+) 1728 WP_009328117.1 ABC transporter ATP-binding protein Regulator
  ETA57_RS11660 (ETA57_11660) rcrQ 2245010..2246833 (+) 1824 WP_009328116.1 ABC transporter ATP-binding protein Regulator
  ETA57_RS11665 (ETA57_11665) - 2247068..2248282 (+) 1215 WP_081329460.1 cytochrome P450 -
  ETA57_RS11670 (ETA57_11670) - 2248331..2249047 (-) 717 WP_003182496.1 3-ketoacyl-ACP reductase -

Sequence

Protein


Download         Length: 607 a.a.        Molecular weight: 67296.64 Da        Isoelectric Point: 6.7496

>NTDB_id=299941 ETA57_RS11660 WP_009328116.1 2245010..2246833(+) (rcrQ) [Bacillus licheniformis strain SRCM103583]
MSQQPKHHGSIPKGMHKTKPKEFKKTLLRLARYLKPRTFQLVLVVFAAILATLFNVISPKLLGDATSSLFASFTEGTGVQ
FGFLGRITLILAGLYLLSAFFTFLQHYLMAGVAQKTIYEMRQEVNEKLTRLPLKYYDKHSHGDTLSRAVNDIDNINTSLQ
QALTQMITSVITIVGIIVMMLLISPVLTLVVFITVPLSMLAVRFIASFSQKHFAAQQKELGDINGHVEEMFTGHQEVKAF
GHEEKAIQQFDEVNERLYQSGWKAQFISGLMMPMMTFIGNLGYVFVSITGGIFVLNGTLLIGGVQAFIQYTQQFSQPLVQ
AAGIANTIQSAIASAERVFSLLDEEEETGETPASIDTGKLKGDVSFEHVAFGYDKNVPVIRDLSLHAKEGQTIAIVGPTG
AGKTTIINLLMRFYELNKGSIKVGGTDISELSREQARSMFAMVLQDTWLFNGTIRENIAYGREGATEEDIIRAAKGAYAD
DFIRTLPDGYDTVLGEDAQNISQGQRQLLTIARAILADPKILILDEATSSVDTRTEMNIQKAMNKLMANRTSFVIAHRLS
TIKDADMILVMKNGDIIEKGSHEELLRKNGFYADLYNSQFSREEAVS

Nucleotide


Download         Length: 1824 bp        

>NTDB_id=299941 ETA57_RS11660 WP_009328116.1 2245010..2246833(+) (rcrQ) [Bacillus licheniformis strain SRCM103583]
ATGAGCCAACAACCAAAGCATCACGGCTCTATACCCAAAGGAATGCACAAGACAAAACCGAAAGAATTTAAAAAGACCCT
TTTGAGATTGGCCCGCTATTTAAAACCGCGGACCTTCCAGCTGGTGCTCGTTGTCTTCGCTGCAATATTGGCGACATTAT
TTAATGTCATCAGTCCAAAACTTCTCGGGGACGCGACCTCTTCCCTTTTCGCAAGCTTTACAGAAGGCACCGGTGTTCAA
TTCGGCTTTCTCGGCCGGATCACGCTGATCCTGGCAGGATTGTATCTGCTTTCTGCTTTCTTTACGTTCTTGCAGCATTA
CCTGATGGCCGGGGTAGCCCAGAAAACGATATACGAAATGCGCCAGGAAGTGAATGAAAAGCTGACGCGGCTCCCTTTAA
AGTACTATGACAAGCATTCGCACGGCGACACGCTCAGCCGCGCCGTCAATGATATCGACAATATCAATACGTCATTGCAG
CAGGCGCTGACGCAAATGATTACGTCTGTCATTACAATAGTCGGAATCATCGTCATGATGCTTTTGATCAGCCCTGTGCT
GACGCTCGTCGTCTTCATCACGGTCCCGCTCAGCATGCTGGCCGTCCGATTCATTGCCTCATTTTCGCAGAAACACTTCG
CCGCGCAGCAAAAAGAACTCGGCGACATCAACGGACACGTTGAAGAAATGTTTACGGGGCATCAGGAAGTAAAGGCATTC
GGGCATGAAGAAAAAGCGATTCAGCAATTCGATGAAGTAAATGAGCGTCTTTACCAGTCAGGCTGGAAAGCGCAGTTTAT
TTCCGGTCTGATGATGCCGATGATGACATTCATCGGCAACCTCGGCTATGTGTTTGTCAGCATAACCGGCGGTATTTTCG
TTCTTAACGGCACCCTTTTGATCGGAGGCGTGCAGGCTTTTATCCAATATACGCAGCAATTTTCCCAGCCGCTCGTTCAA
GCTGCCGGAATCGCGAATACAATCCAATCGGCAATCGCATCCGCCGAAAGGGTGTTCAGTCTTTTGGACGAAGAAGAAGA
AACCGGGGAGACGCCGGCTTCCATCGATACCGGCAAATTAAAAGGCGATGTATCGTTTGAACATGTCGCCTTCGGTTATG
ATAAAAACGTTCCGGTCATCCGCGACTTAAGCCTTCACGCCAAAGAAGGCCAGACGATTGCGATCGTCGGACCGACCGGC
GCTGGAAAAACGACGATCATCAATTTGCTGATGCGTTTTTATGAACTAAACAAAGGCAGCATCAAGGTCGGCGGCACAGA
TATCAGCGAGCTGTCGCGTGAACAGGCGAGAAGCATGTTTGCGATGGTGTTACAGGACACATGGCTGTTCAACGGCACCA
TCCGGGAAAACATCGCTTACGGGCGTGAAGGCGCGACCGAAGAAGACATCATCAGAGCGGCAAAAGGCGCCTATGCCGAC
GATTTTATCCGCACCTTGCCGGACGGCTATGATACGGTACTTGGCGAAGATGCCCAAAACATCTCGCAAGGGCAACGGCA
GCTCTTAACGATCGCGAGAGCCATTTTAGCTGATCCGAAGATTTTAATATTAGATGAAGCGACAAGCAGTGTCGACACCC
GGACGGAAATGAATATTCAAAAAGCGATGAACAAACTGATGGCCAACCGTACGAGCTTTGTTATCGCCCACCGTCTTTCT
ACCATTAAAGATGCCGACATGATTCTTGTGATGAAAAACGGAGATATTATTGAAAAAGGCAGCCACGAAGAGCTGCTCCG
CAAGAACGGATTTTATGCCGATTTGTATAACAGCCAGTTCTCCCGGGAAGAAGCCGTCAGCTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(42-318)

ABC transporter (ABC_tran)

(381-529)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

46.667

96.376

0.45

Multiple sequence alignment