Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   FMG_RS07500 Genome accession   NC_010376
Coordinates   1574607..1576367 (-) Length   586 a.a.
NCBI ID   WP_012291082.1    Uniprot ID   -
Organism   Finegoldia magna ATCC 29328     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1569607..1581367
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FMG_RS07480 (FMG_1422) - 1569768..1570610 (-) 843 Protein_1444 nucleotidyl transferase AbiEii/AbiGii toxin family protein -
  FMG_RS07485 (FMG_1423) - 1570607..1571194 (-) 588 WP_012291079.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein -
  FMG_RS07490 (FMG_1424) rlmD 1571515..1572726 (-) 1212 WP_012291080.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  FMG_RS07495 (FMG_1425) rcrQ 1572818..1574614 (-) 1797 WP_012291081.1 ABC transporter ATP-binding protein Regulator
  FMG_RS07500 (FMG_1426) rcrP 1574607..1576367 (-) 1761 WP_012291082.1 ABC transporter ATP-binding protein Regulator
  FMG_RS07505 (FMG_1427) - 1576342..1576818 (-) 477 WP_002836890.1 MarR family winged helix-turn-helix transcriptional regulator -
  FMG_RS07510 (FMG_1428) thiC 1576983..1578284 (-) 1302 WP_012291083.1 phosphomethylpyrimidine synthase ThiC -
  FMG_RS07515 (FMG_1429) - 1578465..1579379 (-) 915 WP_002840694.1 cyclic pyranopterin monophosphate synthase MoaC/MOSC-domain-containing protein -
  FMG_RS07520 (FMG_1430) moaA 1579381..1580328 (-) 948 WP_012291085.1 GTP 3',8-cyclase MoaA -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 66605.67 Da        Isoelectric Point: 5.2099

>NTDB_id=29985 FMG_RS07500 WP_012291082.1 1574607..1576367(-) (rcrP) [Finegoldia magna ATCC 29328]
MIILIKIFRYLNKKQWIQILLSLVFIVTQVFLDLKIPDYMSKITMYVESPGHTVSDIVGEGKWMLLCAFGSLLSAIIVGY
LASKISASFSKNLRSRIFSKVESFSMKEINEFSTASLITRSTNDITQIQMVIVIGLQILIKAPIMAVWAITKIYNKGFEW
TMATAVTVLVLIVFVAILMVMVMPKFRMMQTLTDNINRILRENLTGLAVIRAYNSEDYREGKFDEANIDLTRTQLFTSRA
MSMLFPMINFSMSMLTLVIYFIGAGLINAAQMMDKYVLFSNMVVFSSYAMQVIMSFMMMSMIFIMVPRAEISAKRINEVL
DTELSIKDGNLDSSNEDYEYEIEFDDVSFKYTDSEQYILQNIDFKVKKGEKVAIIGSTGSGKSTILNLLLRFYDATEGVV
KIQGVDIKQYKLKFLYEKIAAVLQKSFLFKGDIKSNISFGDEDTDTKMVEEAADTSQSIEFIDKFDDKYDHEIAQLGKNV
SGGQKQRLSIARAIYRKPDIFLFDDSFSALDFKTDSELRHQLKENNPDSTTIVVAQRVGSIMDSDQIIVLENGQIVGIGK
HKDLLKNCEVYKEIAYSQLTEEELNA

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=29985 FMG_RS07500 WP_012291082.1 1574607..1576367(-) (rcrP) [Finegoldia magna ATCC 29328]
ATGATAATTTTGATAAAAATATTTAGATATTTGAACAAAAAACAATGGATTCAAATTCTTTTGAGTTTGGTGTTTATCGT
AACTCAAGTGTTTTTGGATTTGAAAATTCCAGATTATATGTCGAAAATTACGATGTATGTGGAAAGTCCGGGTCACACTG
TAAGTGATATTGTTGGAGAGGGCAAATGGATGCTGTTGTGTGCATTTGGTTCTCTTTTATCAGCGATAATTGTAGGATAT
TTGGCATCGAAAATTTCGGCGTCATTTTCCAAAAATTTGAGGTCTAGAATATTTTCCAAGGTGGAAAGTTTCTCGATGAA
AGAAATCAACGAGTTTTCGACAGCAAGCTTGATAACTAGATCTACAAATGATATTACTCAAATTCAAATGGTAATAGTTA
TAGGTTTACAAATTTTGATAAAAGCGCCGATAATGGCAGTCTGGGCAATCACTAAAATCTACAACAAAGGATTTGAATGG
ACAATGGCAACTGCTGTGACTGTTTTGGTTTTAATTGTATTCGTTGCAATACTAATGGTTATGGTTATGCCGAAATTCAG
AATGATGCAAACTTTAACCGACAACATCAACAGGATTTTGCGTGAAAATTTGACAGGACTTGCGGTTATCAGAGCGTACA
ACTCCGAAGATTATAGGGAAGGAAAGTTCGATGAAGCAAACATCGATTTGACAAGAACACAATTGTTCACAAGTCGTGCG
ATGTCGATGCTTTTTCCTATGATTAATTTCAGCATGTCGATGTTGACACTCGTGATTTATTTTATCGGTGCGGGACTCAT
CAATGCTGCGCAAATGATGGACAAATACGTCTTGTTCTCGAACATGGTTGTTTTCAGTTCGTATGCAATGCAAGTTATCA
TGTCATTTATGATGATGAGCATGATTTTCATCATGGTTCCAAGAGCAGAAATTTCTGCCAAACGTATCAACGAAGTTTTG
GATACAGAACTTTCTATAAAAGATGGAAATCTTGATAGCTCAAATGAAGATTACGAATATGAAATTGAATTTGACGATGT
GTCTTTCAAATATACAGATTCTGAACAATATATCTTGCAAAATATTGATTTTAAAGTCAAAAAAGGAGAGAAAGTTGCCA
TCATCGGATCAACTGGATCTGGGAAAAGTACTATCTTGAATTTGCTTTTGAGATTTTACGATGCGACTGAAGGTGTCGTC
AAAATCCAAGGAGTAGATATCAAACAGTACAAGCTCAAATTCTTGTACGAAAAAATCGCAGCAGTGTTGCAAAAATCATT
TCTTTTCAAAGGGGATATTAAATCGAACATTTCTTTTGGAGATGAAGATACCGACACGAAAATGGTAGAAGAAGCAGCGG
ATACTTCACAATCTATAGAATTTATAGATAAATTTGACGACAAATACGACCATGAAATTGCACAATTAGGAAAGAATGTT
TCTGGTGGACAAAAACAAAGACTATCCATTGCAAGAGCAATCTACAGAAAGCCTGATATATTCTTGTTTGACGATAGTTT
CTCGGCACTTGATTTCAAGACAGACAGTGAGCTTAGACATCAACTCAAAGAAAACAACCCTGATTCCACAACGATAGTTG
TCGCTCAAAGAGTGGGATCTATAATGGATTCTGATCAAATAATCGTACTTGAAAATGGCCAAATCGTTGGGATAGGTAAG
CACAAAGATTTATTAAAAAATTGTGAAGTTTACAAAGAAATAGCCTACTCGCAATTAACAGAGGAGGAATTAAATGCCTA
G

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(359-506)

ABC transporter transmembrane region (ABC_membrane)

(20-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

48.49

100

0.493

Multiple sequence alignment