Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ETA15_RS04975 Genome accession   NZ_CP035403
Coordinates   955569..957383 (+) Length   604 a.a.
NCBI ID   WP_129093305.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103581     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 950569..962383
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA15_RS04960 (ETA15_04960) glvR 951386..952150 (+) 765 WP_017696474.1 MurR/RpiR family transcriptional regulator GlvR -
  ETA15_RS04965 (ETA15_04965) malP 952165..953748 (+) 1584 WP_017696473.1 PTS maltose transporter subunit IIBC -
  ETA15_RS04970 (ETA15_04970) yfiB 953854..955575 (+) 1722 WP_017696472.1 ABC transporter ATP-binding protein -
  ETA15_RS04975 (ETA15_04975) rcrQ 955569..957383 (+) 1815 WP_129093305.1 ABC transporter ATP-binding protein Regulator
  ETA15_RS04980 (ETA15_04980) catD 957537..957941 (+) 405 WP_015252533.1 DoxX family oxidoreductase CatD -
  ETA15_RS04985 (ETA15_04985) catE 957959..958816 (+) 858 WP_017696470.1 catechol 2,3-dioxygenase -
  ETA15_RS04990 (ETA15_04990) yfiF 958913..959857 (+) 945 WP_017696469.1 helix-turn-helix domain-containing protein -
  ETA15_RS04995 (ETA15_04995) yfiG 960032..961480 (+) 1449 WP_017696468.1 sugar porter family MFS transporter -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67407.22 Da        Isoelectric Point: 9.8417

>NTDB_id=299744 ETA15_RS04975 WP_129093305.1 955569..957383(+) (rcrQ) [Bacillus subtilis strain SRCM103581]
MLKDIRKPFQYPKLPIDKKEGAKKRAKAKDTKGTLRRIWSYLAERKGLLVLVMLMVVISAIFGLLGPFVIGKAIDHFIVG
KTVSGLIPVLLLLLAIYIIQSLSLWFQNYWMITISQGTVFRMRSELFTHLHELPIPFFDKQRHGELMSRVTNDIENVSST
LNTSVIQILSSVITFVGTIAVMLYMSPLLTLITLTIIPVMAASLKWITNRTGKLFKEQQKNLGDLNGYIEESVSGAKVIK
AYSREKQITAEFLEKNAALKTSGFWAQTISGFIPKVMNSLNNLSFTMIAAIGGLFALKGWISIGSIVVFAEYSRQFTRPL
NDLANQFNTMLSAIAGAERVFDVLDEKEEREDEKNAVHQPIQTGSIEFRDVSFGYDKGQQTLKHLQFTVPPGQSIAFVGP
TGAGKTTVTNLLARFYEPNDGKILINGTDIKTLTRASLRKNMGFVLQDSFLFQGTIRENIRYGRLDASDQEVEAAAKTAN
AHSFIERLPKGYDTVLTQNGSGISQGQKQLISIARAVLADPVLLILDEATSNIDTVTEVNIQEALARLMEGRTSVIIAHR
LNTIQRADQIVVLKNGEMIEKGSHDELIRQKGFYSDLYESQFEK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=299744 ETA15_RS04975 WP_129093305.1 955569..957383(+) (rcrQ) [Bacillus subtilis strain SRCM103581]
ATGCTAAAAGACATCCGCAAGCCTTTCCAATATCCCAAACTGCCAATTGACAAAAAAGAAGGAGCGAAAAAGCGGGCGAA
AGCAAAGGATACAAAGGGCACACTGAGACGAATCTGGTCTTACTTGGCTGAACGAAAAGGACTGCTCGTACTTGTCATGC
TGATGGTTGTCATCAGCGCGATATTCGGGCTCCTTGGCCCCTTTGTGATCGGAAAGGCCATTGACCATTTTATCGTCGGG
AAAACGGTCAGCGGCTTGATTCCCGTTTTGCTTCTTCTGCTCGCTATCTATATCATTCAGTCCCTGTCGCTTTGGTTTCA
AAACTATTGGATGATTACGATCTCGCAGGGCACGGTTTTCAGAATGAGAAGCGAATTGTTCACCCATCTGCATGAGCTGC
CGATTCCATTTTTTGATAAACAGCGGCACGGCGAGCTGATGAGCCGGGTGACGAATGACATCGAAAATGTCAGTTCTACC
TTAAACACGTCAGTCATTCAAATTTTGTCAAGCGTGATCACCTTTGTCGGGACGATTGCGGTGATGCTGTACATGAGCCC
GCTCCTTACATTGATTACGCTGACCATTATTCCGGTGATGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGC
TGTTTAAAGAACAGCAGAAAAATCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAA
GCATATTCACGTGAGAAGCAGATTACTGCTGAATTCCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCA
GACGATTTCCGGGTTTATTCCGAAGGTCATGAACTCTTTGAATAACTTAAGCTTTACAATGATTGCGGCAATCGGCGGTT
TGTTTGCGCTGAAAGGCTGGATCTCGATCGGCTCCATCGTTGTCTTTGCCGAGTATTCAAGACAATTTACACGCCCTTTA
AACGATCTGGCCAACCAGTTTAATACGATGCTGTCCGCAATCGCCGGCGCTGAACGGGTGTTTGACGTGCTTGATGAAAA
AGAAGAGCGCGAGGATGAAAAGAACGCCGTGCATCAGCCCATCCAAACAGGCAGCATTGAATTCCGGGATGTGTCCTTCG
GTTACGATAAAGGGCAGCAGACACTGAAGCATTTACAGTTTACCGTGCCTCCGGGGCAGTCCATCGCGTTTGTAGGACCG
ACGGGGGCGGGGAAGACAACCGTCACTAACCTTCTCGCCCGTTTTTACGAGCCTAACGATGGAAAAATTTTAATCAATGG
TACAGATATTAAAACCCTTACTAGAGCAAGCCTAAGAAAAAACATGGGGTTTGTTCTTCAGGATTCTTTCTTATTTCAGG
GAACGATCAGAGAAAACATTCGCTACGGCAGGCTTGATGCTTCTGATCAGGAAGTCGAAGCCGCTGCAAAAACAGCGAAT
GCCCATAGCTTTATTGAAAGGCTGCCAAAAGGGTATGACACCGTGCTGACGCAAAACGGTTCGGGCATCAGTCAAGGACA
GAAGCAGTTGATTTCTATAGCGAGGGCGGTGCTTGCCGATCCGGTTCTTCTCATTTTGGATGAAGCGACAAGCAACATTG
ATACCGTTACAGAAGTCAACATTCAAGAAGCGCTCGCCCGTTTAATGGAAGGAAGAACAAGCGTCATCATTGCCCACAGG
CTGAACACTATTCAAAGAGCGGACCAGATTGTGGTGCTAAAAAACGGTGAAATGATTGAAAAAGGCAGCCATGACGAGCT
GATTCGGCAAAAAGGATTTTACAGTGACTTATATGAAAGCCAATTTGAGAAATAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(50-320)

ABC transporter (ABC_tran)

(382-531)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.966

96.026

0.374

Multiple sequence alignment