Detailed information
Bioinformatically predicted
Overview
| Name | rapF | Type | Regulator |
| Locus tag | ES969_RS02850 | Genome accession | NZ_CP035402 |
| Coordinates | 538222..539397 (+) | Length | 391 a.a. |
| NCBI ID | WP_080624175.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM103576 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 533222..544397
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ES969_RS02830 (ES969_02830) | cwlT | 534190..535179 (+) | 990 | WP_129133890.1 | bifunctional lytic transglycosylase/C40 family peptidase | - |
| ES969_RS02835 (ES969_02835) | - | 535194..535700 (+) | 507 | WP_080624172.1 | hypothetical protein | - |
| ES969_RS02840 (ES969_02840) | conJ | 535763..536143 (+) | 381 | WP_129134130.1 | DUF4467 domain-containing protein | - |
| ES969_RS02845 (ES969_02845) | - | 536209..537957 (-) | 1749 | WP_080624174.1 | DUF4209 domain-containing protein | - |
| ES969_RS02850 (ES969_02850) | rapF | 538222..539397 (+) | 1176 | WP_080624175.1 | Rap family tetratricopeptide repeat protein | Regulator |
| ES969_RS02855 (ES969_02855) | - | 539354..539473 (+) | 120 | WP_080624176.1 | phosphatase | - |
| ES969_RS02860 (ES969_02860) | - | 539556..540263 (+) | 708 | WP_080624177.1 | hypothetical protein | - |
| ES969_RS02865 (ES969_02865) | - | 540695..541954 (-) | 1260 | WP_014478929.1 | amino acid permease | - |
| ES969_RS02870 (ES969_02870) | - | 542085..542984 (+) | 900 | WP_014478930.1 | LysR family transcriptional regulator | - |
| ES969_RS02875 (ES969_02875) | - | 543477..544040 (-) | 564 | WP_014478932.1 | GNAT family N-acetyltransferase | - |
Sequence
Protein
Download Length: 391 a.a. Molecular weight: 46471.11 Da Isoelectric Point: 5.2971
>NTDB_id=299590 ES969_RS02850 WP_080624175.1 538222..539397(+) (rapF) [Bacillus subtilis strain SRCM103576]
MRGVFLDKDKIPYDLVTKKLNEWYTSIKNDQVEKAEIIKTEVEKELLNMEENQDALLYYQLLEFRHEIMLSYMKSKEIEK
LHNAYETIKEIEEQGQLTGMLEYYYYFFKGMYEFRRKELTTAISAYRIAESKLSEVEDEIEKAEFFFKVSYVYYYMKQTY
FSMNYANRALKIFREYEEYAVQTLRCQFIVAGNLIDSLEYECALQQFLNSLELAKKNNIEHLIAMSHMNIGICYDELKEY
KKASQHLVLALEIFEKSKHSFLTKTLFTLTYVEAKQQNYDVALSYFRKGRFIADKSNDKEYSAKFKILEGLFFSDGDIQL
IKNAFSYLASRKMFADVENFSIEVADYFHEQGNLMLSNEYYRMSIEARRKIKKGEIIDENQPDSIGSSGIR
MRGVFLDKDKIPYDLVTKKLNEWYTSIKNDQVEKAEIIKTEVEKELLNMEENQDALLYYQLLEFRHEIMLSYMKSKEIEK
LHNAYETIKEIEEQGQLTGMLEYYYYFFKGMYEFRRKELTTAISAYRIAESKLSEVEDEIEKAEFFFKVSYVYYYMKQTY
FSMNYANRALKIFREYEEYAVQTLRCQFIVAGNLIDSLEYECALQQFLNSLELAKKNNIEHLIAMSHMNIGICYDELKEY
KKASQHLVLALEIFEKSKHSFLTKTLFTLTYVEAKQQNYDVALSYFRKGRFIADKSNDKEYSAKFKILEGLFFSDGDIQL
IKNAFSYLASRKMFADVENFSIEVADYFHEQGNLMLSNEYYRMSIEARRKIKKGEIIDENQPDSIGSSGIR
Nucleotide
Download Length: 1176 bp
>NTDB_id=299590 ES969_RS02850 WP_080624175.1 538222..539397(+) (rapF) [Bacillus subtilis strain SRCM103576]
TTGCGGGGTGTTTTCTTAGATAAAGATAAAATTCCGTACGACTTAGTCACGAAAAAATTAAATGAATGGTATACATCAAT
AAAAAATGATCAAGTTGAAAAAGCAGAGATTATAAAAACAGAAGTAGAGAAAGAATTGCTAAACATGGAAGAAAACCAAG
ATGCCCTTTTATATTATCAGCTATTAGAATTTAGACATGAGATAATGCTGAGTTATATGAAATCTAAGGAAATAGAAAAA
CTCCATAATGCTTATGAGACCATAAAAGAAATTGAAGAACAAGGGCAATTAACTGGCATGTTGGAATACTATTATTACTT
CTTTAAGGGAATGTACGAGTTTAGACGTAAAGAATTAACTACGGCAATAAGTGCCTATCGAATAGCTGAATCAAAGTTGT
CGGAAGTTGAGGATGAAATAGAAAAAGCAGAGTTTTTTTTCAAAGTGTCCTATGTATATTATTATATGAAACAAACGTAT
TTTTCCATGAATTATGCCAATCGGGCGTTAAAAATATTTAGAGAGTATGAAGAATATGCTGTCCAGACTCTGCGTTGTCA
ATTTATTGTAGCGGGAAACTTAATTGACTCATTAGAGTATGAATGCGCTTTGCAACAATTTTTAAATTCCTTGGAACTTG
CCAAGAAAAATAACATAGAGCATTTAATTGCAATGTCACACATGAATATTGGGATCTGTTATGATGAATTGAAGGAATAT
AAAAAGGCTTCACAACATTTAGTCTTAGCGTTAGAAATTTTCGAAAAATCAAAACATAGTTTCCTAACAAAGACTTTATT
CACTTTAACGTATGTTGAAGCAAAACAACAAAATTATGATGTTGCTTTGTCATACTTTAGGAAAGGGCGATTTATTGCCG
ATAAAAGTAATGATAAGGAATACTCAGCGAAATTCAAAATATTAGAGGGATTATTTTTTTCTGATGGTGATATTCAATTA
ATAAAGAATGCATTTTCATATCTGGCTTCGAGAAAAATGTTTGCTGATGTTGAAAATTTTTCAATTGAAGTCGCTGATTA
TTTTCATGAACAAGGAAATTTAATGCTCTCTAATGAATATTATCGTATGAGTATTGAAGCAAGACGAAAAATTAAAAAAG
GAGAGATTATTGATGAAAATCAGCCGGATTCTATTGGCAGCAGTGGTATTAGGTAG
TTGCGGGGTGTTTTCTTAGATAAAGATAAAATTCCGTACGACTTAGTCACGAAAAAATTAAATGAATGGTATACATCAAT
AAAAAATGATCAAGTTGAAAAAGCAGAGATTATAAAAACAGAAGTAGAGAAAGAATTGCTAAACATGGAAGAAAACCAAG
ATGCCCTTTTATATTATCAGCTATTAGAATTTAGACATGAGATAATGCTGAGTTATATGAAATCTAAGGAAATAGAAAAA
CTCCATAATGCTTATGAGACCATAAAAGAAATTGAAGAACAAGGGCAATTAACTGGCATGTTGGAATACTATTATTACTT
CTTTAAGGGAATGTACGAGTTTAGACGTAAAGAATTAACTACGGCAATAAGTGCCTATCGAATAGCTGAATCAAAGTTGT
CGGAAGTTGAGGATGAAATAGAAAAAGCAGAGTTTTTTTTCAAAGTGTCCTATGTATATTATTATATGAAACAAACGTAT
TTTTCCATGAATTATGCCAATCGGGCGTTAAAAATATTTAGAGAGTATGAAGAATATGCTGTCCAGACTCTGCGTTGTCA
ATTTATTGTAGCGGGAAACTTAATTGACTCATTAGAGTATGAATGCGCTTTGCAACAATTTTTAAATTCCTTGGAACTTG
CCAAGAAAAATAACATAGAGCATTTAATTGCAATGTCACACATGAATATTGGGATCTGTTATGATGAATTGAAGGAATAT
AAAAAGGCTTCACAACATTTAGTCTTAGCGTTAGAAATTTTCGAAAAATCAAAACATAGTTTCCTAACAAAGACTTTATT
CACTTTAACGTATGTTGAAGCAAAACAACAAAATTATGATGTTGCTTTGTCATACTTTAGGAAAGGGCGATTTATTGCCG
ATAAAAGTAATGATAAGGAATACTCAGCGAAATTCAAAATATTAGAGGGATTATTTTTTTCTGATGGTGATATTCAATTA
ATAAAGAATGCATTTTCATATCTGGCTTCGAGAAAAATGTTTGCTGATGTTGAAAATTTTTCAATTGAAGTCGCTGATTA
TTTTCATGAACAAGGAAATTTAATGCTCTCTAATGAATATTATCGTATGAGTATTGAAGCAAGACGAAAAATTAAAAAAG
GAGAGATTATTGATGAAAATCAGCCGGATTCTATTGGCAGCAGTGGTATTAGGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
38.525 |
93.606 |
0.361 |