Detailed information NTG0029922

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: SPP_RS08835
• Genome accession: NC_012467
• Coordinates: 1664039..1665310 (+)
• Length: 423 a.a.
• NCBI ID: WP_001113215.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae P1031
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1659039..1670310

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPP_RS08800 (SPP_1785)	-	1660105..1660533 (-)	429	WP_000418168.1	NUDIX hydrolase	-
SPP_RS08805 (SPP_1786)	-	1660514..1661602 (-)	1089	WP_000719722.1	site-2 protease family protein	-
SPP_RS08810 (SPP_1787)	-	1661621..1662091 (-)	471	WP_000257097.1	DUF3013 family protein	-
SPP_RS08815 (SPP_1788)	-	1662382..1662834 (-)	453	WP_000961810.1	type II toxin-antitoxin system HicB family antitoxin	-
SPP_RS08820	-	1662871..1663049 (-)	179	Protein_1697	type II toxin-antitoxin system HicA family toxin	-
SPP_RS08825 (SPP_1789)	-	1663186..1663365 (-)	180	WP_001048906.1	hypothetical protein	-
SPP_RS08830 (SPP_1790)	-	1663530..1663769 (-)	240	WP_000818078.1	hypothetical protein	-
SPP_RS08835 (SPP_1791)	rarA	1664039..1665310 (+)	1272	WP_001113215.1	replication-associated recombination protein A	Machinery gene
SPP_RS08845 (SPP_1793)	-	1665857..1667176 (-)	1320	WP_000608887.1	glycoside hydrolase family 32 protein	-
SPP_RS08850 (SPP_1794)	-	1667186..1668031 (-)	846	WP_000819520.1	carbohydrate ABC transporter permease	-
SPP_RS08855 (SPP_1795)	-	1668033..1668935 (-)	903	WP_000032531.1	carbohydrate ABC transporter permease	-

Sequence

Protein

• Length: 423 a.a.
• Molecular weight: 47008.42 Da
• Isoelectric Point: 5.9140

>NTDB_id=29922 SPP_RS08835 WP_001113215.1 1664039..1665310(+) (rarA) [Streptococcus pneumoniae P1031]
MPDNLALRMRPKTIDQVIGQEHLVGPGKIIRRMVEANRLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATVDSKKRL
QEISEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLESGLVIMIGATTENPFFSVTPAIRSRVQIFELEPLSNQDVKEALQ
IALSNPERGFDFPIELDEDALDFIATSTNGDLRSAFNSLDLAVLSTPENDEGIRHITLDIMENSLQRSYITMDKDGDGHY
DVLSALQKSIRGSDVDASLHYTARLIEAGDLPSLARRLTVIAYEDIGLANPEAQIHTVTALDAAQRIGFPEARILIANVV
IDLALSPKSNSAYVAMDKALADLKTSGHLPIPRHLRDGHYSGSKELGNAQDYLYPHNYPGNWVKQDYLPEKIRNHHYFQA
EDTGKYERALAQRKEAIDHLRKI

Nucleotide

• Length: 1272 bp

>NTDB_id=29922 SPP_RS08835 WP_001113215.1 1664039..1665310(+) (rarA) [Streptococcus pneumoniae P1031]
ATGCCAGACAATCTCGCGCTTCGCATGCGCCCTAAAACCATCGACCAGGTCATCGGTCAGGAGCATCTGGTCGGACCTGG
AAAAATCATCCGCCGCATGGTGGAAGCCAACCGCCTGTCCTCCATGATTCTATATGGCCCTCCGGGAATCGGCAAAACCA
GTATTGCCTCTGCCATCGCTGGAACGACCAAGTATGCCTTTCGAACTTTCAATGCGACAGTTGATAGTAAAAAGCGACTG
CAAGAAATCTCGGAAGAAGCTAAATTTTCTGGTGGTCTCGTCCTATTGCTAGACGAAATTCATCGACTAGATAAGACCAA
GCAAGACTTCCTCTTGCCTCTCTTGGAAAGTGGACTGGTCATCATGATTGGAGCAACGACTGAAAATCCTTTCTTCTCTG
TCACTCCTGCCATTCGTAGCCGTGTTCAAATTTTCGAGTTGGAACCTCTGTCTAACCAAGACGTCAAAGAGGCCCTGCAG
ATAGCTCTAAGTAACCCTGAACGTGGTTTTGATTTTCCAATAGAACTAGATGAGGATGCGCTGGATTTCATCGCAACCTC
TACAAACGGAGACCTTCGCTCTGCCTTTAACTCACTGGACTTGGCTGTTCTATCTACCCCTGAGAATGACGAGGGCATTC
GCCACATCACCTTAGACATCATGGAAAATAGTCTTCAGAGAAGCTACATCACTATGGACAAGGATGGAGACGGTCACTAT
GATGTTCTATCTGCCCTGCAAAAGTCTATTCGTGGCTCAGATGTGGATGCCAGTCTCCACTATACTGCCCGCTTGATTGA
GGCTGGGGATCTGCCTAGTCTCGCTCGTCGCTTGACTGTTATCGCCTATGAAGATATCGGCTTAGCCAATCCTGAGGCCC
AGATTCATACCGTGACTGCTCTGGATGCTGCACAAAGGATTGGTTTCCCCGAAGCCCGCATTCTCATTGCCAATGTCGTG
ATTGATTTGGCCCTTTCTCCAAAATCCAACTCAGCCTATGTAGCTATGGATAAGGCACTTGCTGACCTCAAAACATCAGG
GCACTTGCCTATTCCGCGACACCTACGTGATGGGCACTACAGTGGAAGCAAGGAACTGGGGAATGCCCAAGACTATCTCT
ATCCACACAACTATCCTGGAAATTGGGTAAAGCAAGACTATCTGCCAGAAAAAATTCGTAATCATCACTATTTCCAAGCA
GAAGATACTGGTAAATATGAACGGGCTTTGGCTCAAAGAAAGGAAGCTATCGACCATTTGCGAAAAATCTGA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	58.435	96.69	0.565