Detailed information NTG0298920

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ES967_RS13745
• Genome accession: NZ_CP035394
• Coordinates: 2635660..2636949 (+)
• Length: 429 a.a.
• NCBI ID: WP_046381234.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103696
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2630660..2641949

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ES967_RS13725 (ES967_13725)	yrrB	2632031..2632651 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
ES967_RS13730 (ES967_13730)	mnmA	2632737..2633852 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
ES967_RS13735 (ES967_13735)	iscSA	2633883..2635022 (-)	1140	WP_033882962.1	cysteine desulfurase family protein	-
ES967_RS13740 (ES967_13740)	cymR	2635041..2635457 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
ES967_RS13745 (ES967_13745)	rarA	2635660..2636949 (+)	1290	WP_046381234.1	replication-associated recombination protein A	Machinery gene
ES967_RS13750 (ES967_13750)	tcdA	2636972..2637736 (-)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
ES967_RS13760 (ES967_13760)	aspS	2638072..2639850 (-)	1779	WP_015251570.1	aspartate--tRNA ligase	-
ES967_RS13765 (ES967_13765)	hisS	2639864..2641138 (-)	1275	WP_032722254.1	histidine--tRNA ligase	-
ES967_RS13770 (ES967_13770)	yrzK	2641520..2641690 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 47468.47 Da
• Isoelectric Point: 7.6407

>NTDB_id=298920 ES967_RS13745 WP_046381234.1 2635660..2636949(+) (rarA) [Bacillus subtilis strain SRCM103696]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRKENKTKKQP

Nucleotide

• Length: 1290 bp

>NTDB_id=298920 ES967_RS13745 WP_046381234.1 2635660..2636949(+) (rarA) [Bacillus subtilis strain SRCM103696]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAAGAAAATAAAACAAAAAA
ACAGCCTTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	98.135	0.981