Detailed information NTG0298612

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ES963_RS14125
• Genome accession: NZ_CP035390
• Coordinates: 2600959..2602224 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103641
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2595959..2607224

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ES963_RS14105 (ES963_14105)	yrrB	2597330..2597950 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
ES963_RS14110 (ES963_14110)	mnmA	2598036..2599151 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
ES963_RS14115 (ES963_14115)	iscSA	2599182..2600321 (-)	1140	WP_014480425.1	cysteine desulfurase family protein	-
ES963_RS14120 (ES963_14120)	cymR	2600340..2600756 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
ES963_RS14125 (ES963_14125)	rarA	2600959..2602224 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
ES963_RS14130 (ES963_14130)	tcdA	2602264..2603028 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
ES963_RS14140 (ES963_14140)	aspS	2603363..2605141 (-)	1779	WP_087614636.1	aspartate--tRNA ligase	-
ES963_RS14145 (ES963_14145)	hisS	2605155..2606429 (-)	1275	WP_087614637.1	histidine--tRNA ligase	-
ES963_RS14150 (ES963_14150)	yrzK	2606811..2606981 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=298612 ES963_RS14125 WP_014480427.1 2600959..2602224(+) (rarA) [Bacillus subtilis strain SRCM103641]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=298612 ES963_RS14125 WP_014480427.1 2600959..2602224(+) (rarA) [Bacillus subtilis strain SRCM103641]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993