Detailed information NTG0298538

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ES963_RS05135
• Genome accession: NZ_CP035390
• Coordinates: 976486..977658 (+)
• Length: 390 a.a.
• NCBI ID: WP_087614474.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103641
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 971486..982658

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ES963_RS05105 (ES963_05105)	cwlT	971589..972578 (+)	990	WP_087614469.1	bifunctional lytic transglycosylase/C40 family peptidase	-
ES963_RS05110 (ES963_05110)	-	972593..973099 (+)	507	WP_043858078.1	hypothetical protein	-
ES963_RS05115 (ES963_05115)	-	973162..973545 (+)	384	WP_087614470.1	cystatin-like fold lipoprotein	-
ES963_RS05120 (ES963_05120)	-	973857..974621 (+)	765	WP_087614471.1	hypothetical protein	-
ES963_RS05125 (ES963_05125)	-	974665..975075 (+)	411	WP_087614472.1	hypothetical protein	-
ES963_RS05130 (ES963_05130)	-	975384..976112 (+)	729	WP_087614473.1	DUF4145 domain-containing protein	-
ES963_RS05135 (ES963_05135)	rapF	976486..977658 (+)	1173	WP_087614474.1	Rap family tetratricopeptide repeat protein	Regulator
ES963_RS05140 (ES963_05140)	-	977922..978368 (-)	447	WP_015252490.1	hypothetical protein	-
ES963_RS05145 (ES963_05145)	yhcN	978518..979087 (+)	570	WP_015252489.1	YhcN/YlaJ family sporulation lipoprotein	-
ES963_RS05150 (ES963_05150)	-	979208..980176 (+)	969	WP_087614475.1	hypothetical protein	-
ES963_RS05155 (ES963_05155)	yhcQ	980108..980761 (-)	654	WP_015715563.1	spore coat protein	-

Sequence

Protein

• Length: 390 a.a.
• Molecular weight: 46117.53 Da
• Isoelectric Point: 5.6997

>NTDB_id=298538 ES963_RS05135 WP_087614474.1 976486..977658(+) (rapF) [Bacillus subtilis strain SRCM103641]
MRGVLDKDKIPYDVVTKRLNEWYTHIKNDALEKAKQIKKEVEEDLKKMEESKDALLYYQLLEFRHELLVNYMNSEKTEEL
KSSYLAMKKLEDQGNVTGMLEYYFHFFMGMYEFRRKKLTAAITSYRKAEAKLSEVDDEIEKAEFFFKVSYVYYYMKQTYF
SLNYAYRALEIYQRYDDYFIQRLRCQFVLGGNFIDSLEYEKALDTFMEALKIAEEIKIDYLIGMAHINIGICFDELKDYK
SASSHLKKALDLLEVSDHSFVAKTLFILTHVKIKQGDKESAGDYFQKGHEFVNKTNDAEYNAKFKILEGLYFSNGEYELI
SEAFAYFDSMKMYADLENYAVEVAQFFHRKQDFQRSSEYYMMSVEARNKIKKGEIINETQSGHIGSSGVN

Nucleotide

• Length: 1173 bp

>NTDB_id=298538 ES963_RS05135 WP_087614474.1 976486..977658(+) (rapF) [Bacillus subtilis strain SRCM103641]
TTGCGAGGTGTTTTAGATAAAGATAAAATTCCATATGATGTAGTTACCAAAAGATTAAACGAATGGTACACTCATATAAA
AAATGATGCTCTTGAGAAAGCTAAACAAATAAAAAAAGAAGTTGAAGAAGATCTAAAAAAAATGGAAGAAAGTAAAGATG
CTTTACTATATTATCAATTACTTGAATTCCGCCACGAGTTATTGGTCAATTACATGAATTCAGAAAAGACAGAAGAATTG
AAAAGTTCATATCTGGCTATGAAAAAGTTGGAGGACCAGGGCAATGTTACTGGAATGTTGGAATATTATTTTCATTTCTT
TATGGGGATGTATGAATTCAGAAGAAAAAAACTAACTGCGGCAATAACTTCATATAGAAAAGCAGAAGCTAAATTAAGTG
AAGTAGATGATGAGATTGAAAAAGCAGAATTCTTTTTTAAAGTATCATATGTTTATTACTATATGAAGCAAACATACTTT
TCGCTTAACTATGCCTATAGAGCTCTTGAAATATATCAAAGGTATGATGATTACTTTATACAGAGATTAAGATGTCAATT
TGTATTAGGTGGAAACTTTATTGACTCCCTAGAATATGAAAAGGCATTGGATACATTTATGGAAGCGTTAAAAATAGCTG
AAGAAATTAAAATTGATTATTTAATTGGGATGGCACACATCAACATAGGTATTTGCTTTGATGAGTTAAAAGACTACAAA
AGTGCATCAAGTCATCTAAAAAAGGCGTTAGATTTGTTAGAGGTTAGCGATCACAGTTTTGTTGCGAAAACTCTTTTTAT
TTTAACACATGTAAAGATCAAGCAAGGTGACAAAGAATCAGCTGGTGACTATTTTCAAAAAGGACATGAGTTTGTAAATA
AAACAAATGATGCTGAATATAATGCTAAATTTAAAATATTAGAAGGACTTTATTTTTCAAATGGTGAATATGAATTGATT
AGTGAGGCTTTTGCATATTTTGATTCAATGAAAATGTATGCAGATTTAGAGAACTATGCTGTTGAAGTGGCCCAATTTTT
TCATCGGAAACAGGATTTTCAACGCTCAAGTGAATATTATATGATGAGTGTTGAAGCAAGAAACAAAATTAAAAAAGGAG
AGATTATTAATGAAACTCAGTCGGGTCATATTGGCAGTAGCGGTGTTAACTAG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (9-69)

• Tetratricopeptide repeat (TPR_12) (198-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	37.831	96.923	0.367