Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   BCERKBAB4_RS12400 Genome accession   NC_010184
Coordinates   2513221..2515095 (+) Length   624 a.a.
NCBI ID   WP_002189721.1    Uniprot ID   R8HNC8
Organism   Bacillus mycoides KBAB4     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2508221..2520095
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BCERKBAB4_RS12385 (BcerKBAB4_2430) - 2508758..2509873 (+) 1116 WP_012260991.1 NAD(P)/FAD-dependent oxidoreductase -
  BCERKBAB4_RS12390 (BcerKBAB4_2431) pssA 2510044..2510535 (-) 492 WP_002136532.1 CDP-diacylglycerol--serine O-phosphatidyltransferase -
  BCERKBAB4_RS12395 (BcerKBAB4_2432) - 2510978..2513224 (+) 2247 WP_012260992.1 ABC transporter ATP-binding protein -
  BCERKBAB4_RS12400 (BcerKBAB4_2433) rcrQ 2513221..2515095 (+) 1875 WP_002189721.1 ABC transporter ATP-binding protein Regulator
  BCERKBAB4_RS12405 (BcerKBAB4_2434) - 2515478..2517196 (+) 1719 WP_012260993.1 alpha-keto acid decarboxylase family protein -
  BCERKBAB4_RS12410 (BcerKBAB4_2435) - 2517288..2518718 (+) 1431 WP_002141919.1 PQQ-dependent sugar dehydrogenase -
  BCERKBAB4_RS12415 (BcerKBAB4_2436) - 2518917..2519489 (+) 573 WP_002013264.1 hypothetical protein -

Sequence

Protein


Download         Length: 624 a.a.        Molecular weight: 69146.13 Da        Isoelectric Point: 6.4365

>NTDB_id=29793 BCERKBAB4_RS12400 WP_002189721.1 2513221..2515095(+) (rcrQ) [Bacillus mycoides KBAB4]
MSDRKIENRKQSGPGPGGGGPMGGGMRKIEKAKNFKGTMNKLLQYLKPYKLSILIVILFAIGSAAFTIVGPKILGNATTK
LFEGLVSKVSGAPGAAIDFTYIGNIVILLLGLYILSTVFGIIQGYIISGVAQKVSYNFRKEIDEKINRMPLKYFDKTTHG
EVLSRITNDVDTVSQTLNQSMSQIITSVITIIGVLIMMLSISWQMTLVALLILPVSMILIMAVVKRSQKYFKSQQEYLGH
VNGQVEEIYSGHNIVKAFNKEEEEVKKFEKVNDTLYHSAWKSQFLSGMMMPIMTFIGNIGYVAVSILGGWLAVKRTIAVG
DILAFVQYVRSFTQPIAQVAQIANVLQSTAAAAERVFEFLEEEEEVPEAENPVKLQKVQGEVTFQDVQFGYNPDKIIIND
FSSNIKPGQKVAIVGPTGAGKTTIVKLLMRFYDINSGAICIDGHDIKDFTREDLRNMFGMVLQDTWLFNGSIMENIRYGR
LDATDEEVIEAAKAAHVHNFVKTLPNKYQMELNEEASNVSQGQKQLLTIARALIADPKILILDEATSSIDTRTEVLIQKA
MENLMEGRTSFIIAHRLSTIRDADLILVMKDGDIVEQGNHEELLKADGFYASLYNSQFEGADAS

Nucleotide


Download         Length: 1875 bp        

>NTDB_id=29793 BCERKBAB4_RS12400 WP_002189721.1 2513221..2515095(+) (rcrQ) [Bacillus mycoides KBAB4]
ATGAGTGATAGAAAAATAGAAAATAGAAAACAAAGCGGCCCTGGTCCTGGCGGTGGCGGTCCTATGGGCGGCGGCATGAG
AAAGATTGAGAAAGCAAAAAACTTCAAAGGAACGATGAATAAACTCCTTCAATACTTGAAGCCCTATAAATTATCAATCT
TAATCGTTATCCTTTTCGCAATCGGCAGTGCAGCCTTTACAATCGTTGGTCCAAAAATTTTAGGAAACGCGACAACAAAA
CTTTTCGAAGGACTCGTAAGCAAAGTATCAGGAGCACCCGGTGCGGCCATTGACTTTACCTATATCGGAAACATTGTCAT
TTTACTCCTTGGATTATATATACTGAGCACTGTGTTTGGTATTATCCAGGGGTACATTATTTCTGGAGTAGCTCAAAAAG
TATCTTATAACTTCAGAAAAGAAATCGATGAAAAAATTAACCGTATGCCGCTGAAATACTTTGATAAAACAACGCACGGC
GAAGTATTATCGAGAATTACAAATGACGTAGATACGGTGAGCCAAACTTTAAACCAAAGTATGTCGCAAATCATCACATC
CGTTATTACAATCATCGGTGTACTTATCATGATGTTATCAATCAGCTGGCAAATGACATTAGTGGCGCTTTTAATATTGC
CAGTATCCATGATTCTCATCATGGCAGTCGTAAAACGATCACAAAAATACTTCAAATCCCAGCAAGAATATTTAGGACAC
GTAAACGGTCAGGTCGAAGAAATTTATAGTGGTCACAATATCGTAAAAGCCTTCAACAAAGAAGAAGAAGAAGTGAAAAA
ATTCGAAAAGGTAAATGATACCCTTTACCATTCCGCATGGAAATCTCAATTTTTATCTGGAATGATGATGCCGATTATGA
CATTTATCGGTAATATCGGTTACGTCGCTGTATCTATTTTAGGTGGATGGCTTGCGGTAAAGAGAACCATCGCAGTTGGA
GACATTTTAGCCTTTGTGCAATATGTTAGAAGCTTTACGCAACCAATCGCTCAAGTAGCACAAATCGCGAACGTACTTCA
ATCTACTGCAGCTGCTGCAGAAAGAGTCTTCGAATTTTTAGAAGAAGAAGAGGAAGTGCCAGAAGCAGAAAATCCAGTGA
AGCTGCAAAAAGTTCAAGGAGAAGTTACCTTCCAAGATGTTCAATTTGGATACAATCCAGATAAGATCATCATCAATGAT
TTCTCATCTAACATTAAACCTGGACAAAAGGTAGCAATCGTCGGACCAACCGGAGCTGGTAAAACAACGATTGTAAAACT
GTTAATGCGTTTCTATGACATAAACAGCGGTGCAATATGTATCGACGGTCACGATATAAAAGACTTCACGCGAGAAGACC
TGCGCAACATGTTTGGTATGGTACTTCAAGACACTTGGCTATTTAACGGCTCCATCATGGAAAATATACGTTACGGTAGA
CTCGATGCTACAGACGAAGAAGTAATTGAAGCAGCGAAAGCAGCTCACGTTCACAACTTCGTAAAAACATTACCAAATAA
ATATCAAATGGAACTAAACGAAGAAGCAAGCAACGTATCCCAAGGACAAAAGCAACTACTAACAATTGCACGTGCCCTTA
TAGCGGATCCGAAAATATTAATACTCGATGAAGCAACAAGCTCCATTGACACTCGTACAGAAGTACTGATTCAAAAAGCG
ATGGAAAACCTTATGGAAGGTAGAACAAGCTTCATTATCGCTCATAGATTATCAACAATACGTGATGCAGATTTAATCCT
TGTCATGAAAGACGGAGATATTGTAGAACAAGGTAATCATGAAGAGTTATTGAAAGCTGATGGTTTCTATGCTTCGCTTT
ATAATAGTCAGTTTGAAGGTGCGGATGCTTCTTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(399-547)

ABC transporter transmembrane region (ABC_membrane)

(53-335)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB R8HNC8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

51.458

93.429

0.481

Multiple sequence alignment