Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   EQH22_RS06210 Genome accession   NZ_CP035258
Coordinates   1246534..1248282 (-) Length   582 a.a.
NCBI ID   WP_061640840.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain TVO_1901927     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1241534..1253282
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH22_RS06175 (EQH22_06480) - 1241701..1242654 (+) 954 WP_001155321.1 IS30-like element ISSpn8 family transposase -
  EQH22_RS06180 (EQH22_06485) - 1242703..1243041 (-) 339 Protein_1244 hypothetical protein -
  EQH22_RS06185 (EQH22_06490) - 1243037..1243288 (-) 252 Protein_1245 replication initiator protein A -
  EQH22_RS06190 (EQH22_06495) - 1243288..1243458 (-) 171 WP_001168348.1 hypothetical protein -
  EQH22_RS06195 (EQH22_06500) rplL 1243645..1244013 (-) 369 WP_001196960.1 50S ribosomal protein L7/L12 -
  EQH22_RS06200 (EQH22_06505) rplJ 1244089..1244589 (-) 501 WP_001287278.1 50S ribosomal protein L10 -
  EQH22_RS06205 (EQH22_06515) - 1244838..1246097 (-) 1260 WP_000862494.1 TRZ/ATZ family protein -
  EQH22_RS06210 (EQH22_06520) rcrQ 1246534..1248282 (-) 1749 WP_061640840.1 ABC transporter ATP-binding protein Regulator
  EQH22_RS06215 (EQH22_06525) - 1248284..1250008 (-) 1725 WP_000681698.1 ABC transporter ATP-binding protein -
  EQH22_RS06220 (EQH22_06530) msrB 1250066..1251004 (-) 939 WP_000818201.1 peptide-methionine (R)-S-oxide reductase MsrB -
  EQH22_RS06225 - 1251065..1251187 (-) 123 WP_152330903.1 chlorohydrolase -
  EQH22_RS06230 (EQH22_06535) thrB 1251263..1252132 (-) 870 WP_000692438.1 homoserine kinase -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 64953.45 Da        Isoelectric Point: 7.0798

>NTDB_id=297211 EQH22_RS06210 WP_061640840.1 1246534..1248282(-) (rcrQ) [Streptococcus pneumoniae strain TVO_1901927]
MKRQTVNQTLKRLAVDLASHPFFLFLAFLGTIAQVGLSIYLPILIGQVIDQVLVAGSSPVFWQIFLQMLLVVIENTLVQW
ANPLLYNRLIFSYTRDLRERIIHKLHRLPIAFVDRQGSGEMVSRVTTDIEQLAAGLTMIFNQFFIGVLMILVSILAMLQI
HLLMTLLVLLLTPLSMVISRFIAKRSYHLFQKQTETRGIQTQLIEESLSQQTIIQSFNAQTEFIQRLREAHDNYSGYSQS
AIFYSSTVNPSTRFVNALIYALLAGVGAYRIMMGSTLTVGRLVTFLNYVQQYTKPFNDISSVLAELQSALACVERIYGVL
DSPEVAETGKEVLTSDQVKGAISFKHVSFGYHPEKILIKELSIDIPAGSKVAIVGPTGAGKSTLINLLMRFYPISSGDIL
LDGQSIYDYTRVSLRQQFGMVLQETWLTQGTIHDNIAFGNPEASREQVIAAAKAANADFFIQQLPQGYDTKLENAGESLS
VGQAQLLTIARVFLAIPKILILDEATSSIDTRTEVLVQDAFAKLMKGRTSFIIAHRLSTIQDADLILVLVDGDIVEYGNH
QELMDRKGKYYQMQKAAAFSSE

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=297211 EQH22_RS06210 WP_061640840.1 1246534..1248282(-) (rcrQ) [Streptococcus pneumoniae strain TVO_1901927]
ATGAAACGACAAACTGTAAACCAGACGCTCAAACGTTTAGCCGTAGATTTAGCAAGCCATCCTTTCTTCCTTTTCCTAGC
CTTTCTAGGAACTATTGCCCAAGTTGGCTTATCAATTTACCTACCTATTCTGATTGGGCAGGTCATTGACCAAGTCCTAG
TGGCTGGTTCATCACCAGTTTTTTGGCAGATTTTTCTCCAGATGCTCTTGGTGGTAATAGAAAATACTCTGGTACAATGG
GCCAATCCTCTCCTCTATAATCGTCTAATCTTCTCTTATACCAGAGATTTACGGGAGCGAATCATCCATAAGCTCCATCG
TTTACCGATTGCCTTTGTAGATAGGCAAGGTAGTGGAGAGATGGTTAGTCGTGTAACCACGGACATCGAACAGTTGGCAG
CTGGCTTGACCATGATTTTTAACCAATTTTTCATTGGTGTTTTGATGATTTTGGTTAGTATTCTAGCCATGCTCCAAATT
CATCTCCTCATGACTCTCTTAGTCTTGCTGTTGACGCCACTGTCCATGGTGATTTCACGCTTTATTGCCAAGAGATCCTA
TCATCTCTTCCAGAAGCAAACAGAGACGAGGGGAATTCAGACTCAGTTGATTGAAGAATCGCTTAGCCAGCAGACTATAA
TCCAGTCCTTCAATGCTCAAACAGAATTTATCCAAAGATTGCGTGAGGCTCATGACAACTACTCAGGCTATTCTCAGTCA
GCCATCTTTTATTCTTCAACGGTCAATCCTTCGACTCGCTTTGTAAATGCACTCATTTATGCCCTTTTAGCTGGAGTAGG
AGCTTATCGTATCATGATGGGTTCAACCTTGACCGTCGGTCGTTTAGTGACTTTTTTGAACTATGTTCAGCAATACACCA
AGCCCTTTAACGATATTTCTTCAGTGCTAGCTGAGTTGCAAAGTGCTCTGGCTTGCGTAGAGCGTATCTATGGAGTCTTA
GATAGCCCTGAAGTGGCTGAAACAGGTAAGGAAGTCTTGACCAGTGACCAAGTTAAGGGAGCTATTTCCTTTAAACATGT
CTCTTTTGGCTACCATCCTGAAAAAATTTTGATTAAGGAGTTGTCTATCGATATTCCAGCTGGTAGTAAGGTAGCCATCG
TTGGTCCGACAGGTGCTGGAAAATCAACTCTTATCAATCTCCTTATGCGTTTTTATCCCATTAGCTCGGGAGATATCTTG
CTGGATGGGCAATCCATTTATGATTATACACGAGTATCATTGAGACAGCAGTTTGGTATGGTGCTTCAAGAAACCTGGCT
CACACAAGGGACCATTCATGATAATATTGCCTTTGGCAATCCTGAAGCCAGTCGAGAGCAAGTAATTGCTGCTGCCAAAG
CAGCTAATGCAGACTTTTTCATCCAACAGTTGCCACAGGGATACGATACCAAGTTGGAAAATGCTGGAGAATCTCTCTCT
GTCGGCCAAGCTCAGCTCTTGACCATAGCCCGAGTCTTTCTGGCTATTCCAAAGATTCTTATCTTAGACGAGGCAACTTC
TTCCATTGATACACGGACAGAAGTGCTGGTACAGGATGCCTTTGCAAAACTCATGAAGGGCCGCACAAGCTTCATCATTG
CTCACCGTTTGTCAACCATTCAGGATGCGGATTTAATTCTTGTCTTAGTAGATGGTGATATTGTTGAATATGGTAACCAT
CAAGAACTCATGGATAGAAAGGGTAAGTATTACCAAATGCAAAAAGCTGCGGCTTTTAGTTCTGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(359-507)

ABC transporter transmembrane region (ABC_membrane)

(24-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.083

97.766

0.363

Multiple sequence alignment