Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   SUB_RS07805 Genome accession   NC_012004
Coordinates   1550245..1552578 (-) Length   777 a.a.
NCBI ID   WP_015911866.1    Uniprot ID   B9DVK7
Organism   Streptococcus uberis 0140J     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1545245..1557578
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SUB_RS07775 (SUB1553) - 1546332..1546997 (+) 666 WP_015911861.1 DUF1129 domain-containing protein -
  SUB_RS07780 (SUB1555) rpsR 1547332..1547571 (-) 240 WP_002983142.1 30S ribosomal protein S18 -
  SUB_RS07785 (SUB1556) ssb 1547625..1548116 (-) 492 WP_015911862.1 single-stranded DNA-binding protein Machinery gene
  SUB_RS07790 (SUB1557) rpsF 1548137..1548427 (-) 291 WP_015911863.1 30S ribosomal protein S6 -
  SUB_RS07795 (SUB1558) mutY 1548650..1549807 (+) 1158 WP_041817674.1 A/G-specific adenine glycosylase -
  SUB_RS07800 (SUB1559) trxA 1549819..1550133 (-) 315 WP_015911865.1 thioredoxin -
  SUB_RS07805 (SUB1560) mutS/mutS2 1550245..1552578 (-) 2334 WP_015911866.1 endonuclease MutS2 Machinery gene
  SUB_RS07810 (SUB1561) - 1552647..1553192 (-) 546 WP_015911867.1 CvpA family protein -
  SUB_RS07815 (SUB1562) zapA 1553195..1553503 (-) 309 WP_015911868.1 cell division protein ZapA -
  SUB_RS07820 (SUB1563) rnhC 1553623..1554528 (+) 906 WP_015911869.1 ribonuclease HIII -
  SUB_RS07825 (SUB1564) lepB 1554543..1555136 (+) 594 WP_015911870.1 signal peptidase I -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87924.52 Da        Isoelectric Point: 6.6843

>NTDB_id=29709 SUB_RS07805 WP_015911866.1 1550245..1552578(-) (mutS/mutS2) [Streptococcus uberis 0140J]
MNQKILEQLEFQKVKEQFQPYLQTAQGIQELRLLEPSNHYDKISDYFKEIAEMATIFVENHHFSIGNLRDVSESMRRLEL
EADLNIQELLDIKKLLLVSGEISRFYQDLENVDLQVLKRIFEKIEVFPQLQGSLQAVNDAAFIENFASPELDRLRRQIAE
NERYSRQLLQDILKKNADYLSESLIASRNGKSVLPVKNTFRHRVSGVVHDISASGNTVYIEPRALVQVNEEMTQLLADER
HEIARILKELSQLLRPHSRALANNAWLLGHLDFVRAKYHYLVNNKATIPKISKDKNIQLLNVRHPLLKNPVANDLHFADD
LAVIVITGPNTGGKTIMLKTLGLAQLMGQSGLPILADEGSKIAVFDAIYADIGDEQSIEQSLSTFSSHMTHIVDILEESN
SNSLVLFDELGAGTDPQEGASLAMAILEQLRLTNIKTMATTHYPELKAYGIESDYVENASMEFDSQSLKPTYRFMQGVPG
RSNAFEIARRLGLAETIVKEAEQMTDTDSDVNRIIEELERQTLSSRRRLDHIREVEQENIKFNRAVKKLYNEFSLAKDKE
IEKASQEAQAIVELALTESEEILSKLHEKAELKPHEIIEAKSKLKSLVPQRDLSKNKVLKKAKKLREPRIGDDIIVSAYG
QRGTLIGQVKGNKWEAQVGLIKMTLKEDEFQLVKVEAEAQKPKKQSINMVKKANQNGPRARLDLRGKRYEEAMQELDAFI
DQALVNNMSQVDIIHGIGTGVIREAVTKYLRRHKHVKSFAYAPQNAGGSGCTIATLG

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=29709 SUB_RS07805 WP_015911866.1 1550245..1552578(-) (mutS/mutS2) [Streptococcus uberis 0140J]
ATGAATCAAAAAATTTTAGAACAATTAGAATTTCAAAAAGTTAAAGAACAATTCCAACCCTATCTGCAGACAGCGCAAGG
AATCCAGGAATTACGTCTTCTTGAACCAAGCAACCACTATGACAAGATTTCAGATTACTTTAAAGAAATTGCTGAAATGG
CAACCATTTTTGTGGAAAATCATCATTTTTCAATAGGGAATCTTCGCGATGTCTCCGAGAGTATGCGTCGCTTGGAACTA
GAAGCAGACTTGAATATCCAAGAGTTGTTAGATATCAAAAAACTGCTCTTAGTTTCTGGGGAAATCAGTCGCTTTTACCA
AGATTTAGAAAATGTGGACCTTCAGGTTTTAAAACGAATATTTGAAAAAATAGAAGTCTTTCCACAATTACAAGGAAGTT
TACAGGCTGTTAATGATGCAGCCTTTATTGAAAATTTTGCCAGTCCAGAATTGGATCGCCTTAGACGTCAAATAGCAGAA
AATGAACGTTATAGCCGCCAATTGCTACAAGACATCCTAAAGAAAAATGCAGATTATTTGTCTGAATCATTGATTGCTAG
TCGTAATGGTAAGAGTGTTCTACCTGTTAAGAATACTTTTCGTCACAGAGTTTCAGGGGTTGTCCATGATATCTCAGCAT
CTGGAAATACCGTTTACATTGAACCTCGTGCCTTAGTGCAAGTCAATGAAGAAATGACGCAATTACTAGCAGATGAAAGG
CATGAAATTGCAAGGATACTCAAAGAGTTGTCACAGCTGTTACGTCCTCATAGTCGTGCGCTAGCAAATAATGCATGGCT
TTTGGGACATCTAGATTTTGTTAGAGCAAAGTATCATTATCTTGTTAATAACAAAGCAACCATCCCTAAAATTAGCAAGG
ATAAAAATATCCAGCTATTAAATGTTAGACACCCCTTGTTAAAAAATCCTGTGGCCAATGATTTGCATTTTGCAGATGAT
TTAGCCGTGATTGTGATTACGGGCCCTAATACAGGTGGTAAGACCATAATGCTTAAAACACTGGGATTAGCACAATTAAT
GGGTCAGTCAGGTCTCCCAATATTAGCAGATGAAGGCTCAAAAATAGCTGTTTTTGATGCCATTTATGCCGACATAGGCG
ATGAGCAATCCATCGAACAAAGTCTATCAACCTTCTCAAGTCATATGACACATATCGTTGACATTTTAGAGGAATCAAAT
AGTAACAGTTTAGTCCTTTTTGATGAACTGGGTGCAGGAACAGATCCACAAGAAGGTGCCAGTCTTGCTATGGCAATCTT
AGAGCAATTACGCTTAACCAATATCAAAACCATGGCAACAACTCATTATCCAGAGCTCAAAGCCTATGGTATTGAAAGTG
ACTATGTCGAAAATGCTAGCATGGAATTTGATAGTCAAAGCCTAAAACCCACTTATCGCTTTATGCAAGGTGTTCCTGGT
CGATCCAACGCCTTTGAAATTGCTCGTCGACTTGGTTTAGCTGAAACGATTGTGAAAGAAGCGGAGCAGATGACAGATAC
CGATAGTGACGTCAATCGTATCATAGAAGAGTTAGAACGACAGACGCTTTCTAGCCGGCGACGCCTTGATCATATCAGAG
AAGTTGAGCAGGAAAATATAAAATTCAATCGTGCTGTCAAGAAACTCTATAATGAATTCTCTCTGGCGAAAGACAAGGAA
ATTGAGAAAGCTAGTCAAGAAGCGCAAGCTATTGTTGAGTTAGCCTTAACCGAAAGTGAAGAGATTTTGAGTAAGCTCCA
TGAAAAAGCAGAGCTTAAACCACATGAAATTATTGAAGCAAAATCAAAACTGAAGTCACTGGTTCCTCAAAGAGATTTAT
CTAAGAATAAAGTTCTGAAAAAAGCTAAGAAATTAAGAGAGCCTAGGATAGGTGATGATATTATTGTTTCTGCATATGGT
CAACGCGGAACCTTAATTGGTCAAGTGAAAGGGAATAAGTGGGAAGCTCAAGTTGGACTGATTAAGATGACTTTAAAAGA
GGATGAATTCCAACTCGTAAAAGTGGAAGCGGAAGCACAAAAACCTAAAAAACAAAGTATTAACATGGTTAAAAAAGCCA
ATCAAAATGGTCCTCGGGCACGTTTAGATCTTCGTGGGAAACGTTATGAAGAAGCCATGCAAGAACTAGATGCCTTTATA
GACCAAGCATTGGTTAATAATATGAGCCAGGTTGATATCATCCATGGTATTGGAACAGGTGTCATTAGAGAAGCTGTTAC
CAAATATCTTCGCCGTCATAAACATGTTAAGAGTTTCGCTTATGCTCCTCAAAACGCAGGTGGTTCAGGTTGTACGATAG
CAACCTTGGGATAA

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(630-669)

Smr domain (Smr)

(702-776)

MutS domain V (MutS_V)

(324-505)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB B9DVK7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

40.609

100

0.412