Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   EQH37_RS06410 Genome accession   NZ_CP035243
Coordinates   1283923..1285671 (-) Length   582 a.a.
NCBI ID   WP_054362646.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain TVO_1901946     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1278923..1290671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQH37_RS06365 (EQH37_06720) - 1278955..1279542 (-) 588 WP_000821287.1 CPBP family intramembrane glutamic endopeptidase -
  EQH37_RS06370 - 1279545..1279778 (-) 234 Protein_1281 transcriptional regulator -
  EQH37_RS06375 (EQH37_06725) - 1279791..1280171 (-) 381 WP_000566531.1 arsenate reductase family protein -
  EQH37_RS06380 (EQH37_06730) - 1280164..1280504 (-) 341 Protein_1283 hypothetical protein -
  EQH37_RS06385 (EQH37_06735) - 1280515..1280766 (-) 252 Protein_1284 replication initiator protein A -
  EQH37_RS06390 (EQH37_06740) - 1280766..1280936 (-) 171 WP_001168348.1 hypothetical protein -
  EQH37_RS06395 (EQH37_06745) rplL 1281123..1281491 (-) 369 WP_001196960.1 50S ribosomal protein L7/L12 -
  EQH37_RS06400 (EQH37_06750) rplJ 1281567..1282067 (-) 501 WP_001287278.1 50S ribosomal protein L10 -
  EQH37_RS06405 (EQH37_06760) - 1282317..1283576 (-) 1260 WP_000862486.1 TRZ/ATZ family protein -
  EQH37_RS06410 (EQH37_06765) rcrQ 1283923..1285671 (-) 1749 WP_054362646.1 ABC transporter ATP-binding protein Regulator
  EQH37_RS06415 (EQH37_06770) - 1285673..1287397 (-) 1725 WP_000681689.1 ABC transporter ATP-binding protein -
  EQH37_RS06420 (EQH37_06775) msrB 1287455..1288393 (-) 939 WP_000818203.1 peptide-methionine (R)-S-oxide reductase MsrB -
  EQH37_RS06425 - 1288460..1288657 (-) 198 WP_025169195.1 hypothetical protein -
  EQH37_RS06430 (EQH37_06785) thrB 1288733..1289602 (-) 870 WP_000692438.1 homoserine kinase -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 64860.37 Da        Isoelectric Point: 7.3120

>NTDB_id=295763 EQH37_RS06410 WP_054362646.1 1283923..1285671(-) (rcrQ) [Streptococcus pneumoniae strain TVO_1901946]
MKRQTVNQTLKRLAVDLANHPFLLFLAFLGTIAQVGLSIYLPILIGQVIDQVLVAGSSPVFWQIFLQMLLVVIGNTLVQW
ANPLLYNRLIFSYTRDLRERIIHKLHRLPIAFVDRQGSGEMVSRVTTDIEQLAAGLTMIFNQFFIGVLMILVSILAMLQI
HLLMTLLVLLLTPLSMVISRFIAKRSYHLFQKQTETRGIQTQLIEESLSQQTIIQSFNAQTEFIQRLREAHDNYSGYSQS
AIFYSSTVNPSTRFVNALIYALLAGVGAYRIMMGSTLTVGRLVTFLNYVQQYTKPFNDISSVLAELQSALACVERIYGVL
DSPEVAETGKEVLTSDQVKGAISFKHVSFGYHPEKILIKDLSIDIPAGSKVAIVGPTGAGKSTLINLLMRFYPISSGDIL
LDGQSIYDYTRVSLRQQFGMVLQETWLTQGTIHDNIAFGNPEASREQVIAAAKAANADFFIQQLPQGYDTKLENAGESLS
VGQAQLLTIARVFLAIPKILILDEATSSIDTRTEVLVQDAFAKLMKGRTSFIIAHRLSTIQDADLILVLVDGDIVEYGNH
QELMDRKGKYYQMQKAAAFSSE

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=295763 EQH37_RS06410 WP_054362646.1 1283923..1285671(-) (rcrQ) [Streptococcus pneumoniae strain TVO_1901946]
ATGAAACGACAAACTGTAAACCAGACGCTCAAACGTTTAGCCGTAGATTTAGCAAACCATCCCTTCCTCCTTTTCCTAGC
CTTTCTAGGAACTATTGCCCAAGTTGGCTTATCAATTTACCTACCTATTCTGATTGGGCAGGTCATTGACCAAGTCCTAG
TGGCTGGTTCATCACCAGTTTTTTGGCAGATTTTTCTCCAGATGCTCTTGGTGGTAATAGGAAATACTCTGGTACAATGG
GCCAATCCTCTCCTCTATAATCGTCTAATCTTCTCTTATACCAGAGATTTACGGGAGCGAATCATCCATAAACTCCATCG
GTTACCGATTGCCTTTGTAGATAGGCAAGGTAGTGGAGAGATGGTTAGTCGTGTAACCACGGACATCGAACAGTTGGCAG
CTGGCTTGACCATGATTTTTAACCAATTTTTCATTGGTGTTTTGATGATTTTGGTTAGTATTCTAGCCATGCTCCAAATT
CATCTCCTCATGACTCTCTTAGTCTTGCTGTTGACGCCACTGTCCATGGTGATTTCACGCTTTATTGCCAAGAGATCCTA
TCATCTCTTCCAGAAGCAAACAGAGACGAGGGGAATTCAGACTCAGTTGATTGAAGAATCGCTTAGCCAGCAGACTATAA
TCCAGTCCTTCAATGCTCAAACAGAATTTATCCAAAGATTGCGTGAGGCTCATGACAACTACTCAGGCTATTCTCAGTCA
GCCATCTTTTATTCTTCAACGGTCAATCCTTCGACTCGCTTTGTAAATGCACTCATTTATGCCCTTTTAGCTGGAGTAGG
AGCTTATCGTATCATGATGGGTTCAACCTTGACCGTCGGTCGTTTAGTGACTTTTTTGAACTATGTTCAGCAATACACCA
AGCCCTTTAACGATATTTCTTCAGTGCTAGCTGAGTTGCAAAGTGCTCTGGCTTGCGTAGAGCGTATCTATGGAGTCTTA
GATAGCCCTGAAGTGGCTGAAACAGGTAAGGAAGTCTTGACCAGTGACCAAGTTAAGGGAGCTATTTCCTTTAAACATGT
CTCTTTTGGCTACCATCCTGAAAAAATTTTGATTAAGGACTTGTCTATCGATATTCCAGCTGGTAGTAAGGTAGCCATCG
TTGGTCCGACAGGTGCTGGAAAATCAACTCTTATCAATCTCCTTATGCGTTTTTATCCCATTAGCTCGGGAGATATCTTG
CTGGATGGGCAATCCATTTATGATTATACACGAGTATCATTGAGACAGCAGTTTGGTATGGTGCTTCAAGAAACCTGGCT
CACACAAGGGACCATTCATGATAATATTGCCTTTGGCAATCCTGAAGCCAGTCGAGAGCAAGTAATTGCTGCTGCCAAAG
CAGCTAATGCAGACTTTTTCATCCAACAGTTGCCACAGGGATACGATACCAAGTTGGAAAATGCTGGAGAATCTCTCTCT
GTCGGCCAAGCTCAGCTCTTGACCATAGCCCGAGTCTTTCTGGCTATTCCAAAGATTCTTATCTTAGACGAGGCAACTTC
TTCCATTGATACACGGACAGAAGTGCTGGTACAGGATGCCTTTGCAAAACTCATGAAGGGCCGCACAAGCTTCATCATTG
CTCACCGTTTGTCAACCATTCAGGATGCGGATTTAATTCTTGTCTTAGTAGATGGTGATATTGTTGAATATGGTAACCAT
CAAGAACTCATGGATAGAAAGGGTAAGTATTACCAAATGCAAAAAGCTGCGGCTTTTAGTTCTGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(359-507)

ABC transporter transmembrane region (ABC_membrane)

(24-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.434

97.766

0.366