Detailed information NTG0294564

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: EQY76_RS14225
• Genome accession: NZ_CP035230
• Coordinates: 2646325..2647614 (+)
• Length: 429 a.a.
• NCBI ID: WP_046381234.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103551
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2641325..2652614

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQY76_RS14205 (EQY76_14205)	yrrB	2642696..2643316 (-)	621	WP_202926392.1	tetratricopeptide repeat protein	-
EQY76_RS14210 (EQY76_14210)	mnmA	2643402..2644517 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
EQY76_RS14215 (EQY76_14215)	iscSA	2644548..2645687 (-)	1140	WP_033882962.1	cysteine desulfurase family protein	-
EQY76_RS14220 (EQY76_14220)	cymR	2645706..2646122 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
EQY76_RS14225 (EQY76_14225)	rarA	2646325..2647614 (+)	1290	WP_046381234.1	replication-associated recombination protein A	Machinery gene
EQY76_RS14230 (EQY76_14230)	tcdA	2647637..2648401 (-)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
EQY76_RS14240 (EQY76_14240)	aspS	2648737..2650515 (-)	1779	WP_015251570.1	aspartate--tRNA ligase	-
EQY76_RS14245 (EQY76_14245)	hisS	2650529..2651803 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
EQY76_RS14250 (EQY76_14250)	yrzK	2652185..2652355 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 47468.47 Da
• Isoelectric Point: 7.6407

>NTDB_id=294564 EQY76_RS14225 WP_046381234.1 2646325..2647614(+) (rarA) [Bacillus subtilis strain SRCM103551]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRKENKTKKQP

Nucleotide

• Length: 1290 bp

>NTDB_id=294564 EQY76_RS14225 WP_046381234.1 2646325..2647614(+) (rarA) [Bacillus subtilis strain SRCM103551]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAAGAAAATAAAACAAAAAA
ACAGCCTTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	98.135	0.981