Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   EQW70_RS04485 Genome accession   NZ_CP035226
Coordinates   876175..877989 (+) Length   604 a.a.
NCBI ID   WP_128740133.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103517     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 871175..882989
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQW70_RS04475 (EQW70_04475) - 871713..874046 (+) 2334 WP_128740132.1 peptidase G2 autoproteolytic cleavage domain-containing protein -
  EQW70_RS04480 (EQW70_04480) yfiB 874460..876181 (+) 1722 WP_049140600.1 ABC transporter ATP-binding protein -
  EQW70_RS04485 (EQW70_04485) rcrQ 876175..877989 (+) 1815 WP_128740133.1 ABC transporter ATP-binding protein Regulator
  EQW70_RS04490 (EQW70_04490) catD 878143..878547 (+) 405 WP_049140598.1 DoxX family oxidoreductase CatD -
  EQW70_RS04495 (EQW70_04495) catE 878565..879422 (+) 858 WP_049140597.1 catechol 2,3-dioxygenase -
  EQW70_RS04500 (EQW70_04500) - 879540..880742 (+) 1203 WP_080351437.1 sensor histidine kinase -
  EQW70_RS04505 (EQW70_04505) lnrK 880739..881401 (+) 663 WP_032726622.1 two-component system response regulator LnrK -
  EQW70_RS04515 (EQW70_04515) lnrL 881544..882478 (+) 935 Protein_836 linearmycin resistance ATP-binding protein LnrL -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67455.22 Da        Isoelectric Point: 9.6212

>NTDB_id=294187 EQW70_RS04485 WP_128740133.1 876175..877989(+) (rcrQ) [Bacillus subtilis strain SRCM103517]
MLKDIRKPFQYPKLPIDKKEGAKKRAKAKDTKDTLRRIWSYLAERKGLLVLVMLMVVISAIFGLLGPFVIGKAIDHFIVG
KTVSGLIPVLLLLLAIYIIQSLSLWFQNYWMITISQGTVFRMRSELFTHLHELPIPFFDKQRHGELMSRVTNDIENVSST
LNTSVIQILSSVITFVGTIAVMLYMSPLLTLITLTIIPVMAASLKWITNRTGKLFKEQQKNLGDLNGYIEESVSGAKVIK
AYSREKQITAEFLEKNAALKTSGFWAQTISGFIPKVMNSLNNLSFTMIAAIGGLFALKGWISIGSIVVFAEYSRQFTRPL
NDLANQFNTMLSAIAGAERVFDVLDEKEEREDEKNAVHQPIQTGSIEFRDVSFGYDKGQQTLKHLQFTVPAGQSIAFVGP
TGAGKTTVTNLIARFYEPNEGKILIDGTDIKTLTRASLRKNMGFVLQDSFLFQGTIRENIRYGRLDASDQEVEAAAKTAN
AHSFIERLPKGYDTVLTQNGSGISQGQKQLISIARAVLADPVLLILDEATSNIDTVTEVNIQEALARLMEGRTSVIIAHR
LNTIQRADQIVVLKDGEMIEKGSHDELIRQKGFYSDLYESQFEK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=294187 EQW70_RS04485 WP_128740133.1 876175..877989(+) (rcrQ) [Bacillus subtilis strain SRCM103517]
ATGCTAAAAGACATCCGCAAGCCTTTCCAATATCCCAAACTGCCAATTGACAAAAAAGAAGGAGCGAAAAAGCGGGCGAA
AGCAAAGGATACAAAGGACACACTGAGACGAATCTGGTCTTACTTGGCTGAACGAAAAGGACTGCTCGTACTTGTCATGC
TGATGGTTGTCATCAGCGCGATATTCGGGCTCCTTGGCCCCTTTGTGATCGGAAAGGCCATTGACCATTTTATCGTCGGG
AAAACGGTCAGCGGCTTGATTCCCGTTTTGCTTCTTCTGCTCGCTATCTATATCATTCAGTCCCTGTCGCTTTGGTTTCA
AAACTATTGGATGATTACGATCTCGCAGGGCACGGTTTTCAGAATGAGAAGCGAATTGTTCACCCATCTGCATGAGCTGC
CGATTCCATTTTTTGATAAACAGCGGCACGGCGAGCTGATGAGCCGGGTGACGAATGACATCGAAAATGTCAGTTCTACC
TTAAACACGTCAGTCATTCAAATTTTGTCAAGCGTGATCACCTTTGTCGGGACGATTGCGGTGATGCTGTACATGAGCCC
GCTCCTTACATTGATTACGCTGACCATTATTCCGGTGATGGCAGCGAGCCTGAAATGGATCACCAACCGAACGGGAAAGC
TGTTTAAAGAACAGCAGAAAAACCTTGGTGATCTGAATGGGTATATTGAGGAATCTGTTTCAGGCGCAAAGGTCATCAAA
GCATATTCACGTGAGAAGCAGATTACTGCTGAATTTCTCGAAAAAAACGCTGCACTCAAGACGTCGGGCTTTTGGGCGCA
GACGATTTCCGGGTTTATCCCGAAGGTCATGAACTCTTTGAATAACTTAAGCTTTACAATGATAGCGGCAATCGGCGGTT
TGTTTGCGCTGAAAGGCTGGATCTCGATCGGCTCCATCGTCGTCTTTGCCGAGTATTCAAGACAATTTACACGCCCTTTA
AACGATCTGGCCAACCAGTTTAATACGATGCTGTCCGCAATCGCCGGCGCTGAACGGGTGTTTGACGTGCTTGATGAAAA
AGAAGAGCGCGAGGATGAAAAGAACGCCGTGCATCAGCCCATCCAAACAGGCAGCATTGAATTCCGGGATGTGTCCTTCG
GTTACGATAAAGGGCAGCAGACACTGAAGCATTTACAGTTTACCGTGCCTGCGGGGCAGTCCATCGCGTTTGTCGGACCG
ACGGGGGCGGGGAAGACAACCGTCACTAACCTTATCGCCCGTTTTTACGAGCCTAACGAAGGAAAAATTTTAATCGACGG
TACAGATATTAAAACCCTTACTAGAGCAAGCCTGAGAAAAAACATGGGGTTTGTTCTTCAGGATTCTTTCTTATTTCAGG
GAACGATCAGAGAAAACATTCGCTACGGCAGGCTTGATGCTTCTGATCAGGAAGTCGAAGCCGCTGCAAAAACAGCGAAT
GCCCATAGTTTTATTGAAAGGCTGCCAAAAGGGTATGACACCGTGCTGACGCAAAACGGTTCGGGCATCAGTCAAGGACA
GAAGCAGTTGATTTCTATAGCGAGGGCGGTGCTTGCCGATCCGGTTCTTCTCATTTTGGATGAAGCGACAAGCAACATTG
ATACCGTTACAGAAGTCAACATTCAAGAAGCGCTCGCCCGTTTAATGGAAGGAAGAACAAGCGTCATCATTGCCCACAGG
CTGAACACCATTCAAAGAGCGGACCAGATTGTGGTGCTAAAAGATGGTGAAATGATTGAAAAAGGCAGCCATGACGAGCT
GATTCGGCAAAAAGGATTTTACAGTGACTTATATGAAAGCCAATTTGAGAAATAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(50-320)

ABC transporter (ABC_tran)

(382-531)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

39.31

96.026

0.377

Multiple sequence alignment