Detailed information NTG0294112

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: EQJ84_RS13795
• Genome accession: NZ_CP035191
• Coordinates: 2652120..2653385 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM104011
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2647120..2658385

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQJ84_RS13775 (EQJ84_13775)	yrrB	2648491..2649111 (-)	621	WP_205764506.1	tetratricopeptide repeat protein	-
EQJ84_RS13780 (EQJ84_13780)	mnmA	2649197..2650312 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
EQJ84_RS13785 (EQJ84_13785)	iscSA	2650343..2651482 (-)	1140	WP_041850172.1	cysteine desulfurase family protein	-
EQJ84_RS13790 (EQJ84_13790)	cymR	2651501..2651917 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
EQJ84_RS13795 (EQJ84_13795)	rarA	2652120..2653385 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
EQJ84_RS13800 (EQJ84_13800)	tcdA	2653425..2654189 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
EQJ84_RS13810 (EQJ84_13810)	aspS	2654524..2656302 (-)	1779	WP_015714438.1	aspartate--tRNA ligase	-
EQJ84_RS13815 (EQJ84_13815)	hisS	2656316..2657590 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
EQJ84_RS13820 (EQJ84_13820)	yrzK	2657972..2658142 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=294112 EQJ84_RS13795 WP_014480427.1 2652120..2653385(+) (rarA) [Bacillus subtilis strain SRCM104011]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=294112 EQJ84_RS13795 WP_014480427.1 2652120..2653385(+) (rarA) [Bacillus subtilis strain SRCM104011]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993