Detailed information NTG0293559

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: DLJ51_RS00900
• Genome accession: NZ_CP029560
• Coordinates: 154743..155069 (+)
• Length: 108 a.a.
• NCBI ID: WP_019770073.1
• Uniprot ID: -
• Organism: Streptococcus sobrinus strain NIDR 6715-7
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 149743..160069

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DLJ51_RS00885 (DLJ51_00885)	-	152038..152406 (+)	369	WP_019781971.1	DUF1033 family protein	-
DLJ51_RS00890 (DLJ51_00890)	comGA/cglA	152832..153779 (+)	948	WP_019777327.1	competence type IV pilus ATPase ComGA	Machinery gene
DLJ51_RS00895 (DLJ51_00895)	comYB	153703..154746 (+)	1044	WP_002959504.1	competence type IV pilus assembly protein ComGB	Machinery gene
DLJ51_RS00900 (DLJ51_00900)	comYC	154743..155069 (+)	327	WP_019770073.1	competence type IV pilus major pilin ComGC	Machinery gene
DLJ51_RS00905 (DLJ51_00905)	comYD	155023..155457 (+)	435	WP_254051091.1	competence type IV pilus minor pilin ComGD	Machinery gene
DLJ51_RS00910 (DLJ51_00910)	comYE	155429..155722 (+)	294	WP_002959510.1	competence type IV pilus minor pilin ComGE	Machinery gene
DLJ51_RS00915 (DLJ51_00915)	comYF	155706..156143 (+)	438	WP_019781940.1	competence type IV pilus minor pilin ComGF	Machinery gene
DLJ51_RS00920 (DLJ51_00920)	comGG	156121..156582 (+)	462	WP_019785527.1	competence type IV pilus minor pilin ComGG	-
DLJ51_RS00930 (DLJ51_00930)	-	156784..157050 (+)	267	WP_002959516.1	type II toxin-antitoxin system RelE/ParE family toxin	-
DLJ51_RS00935 (DLJ51_00935)	-	157037..157312 (+)	276	WP_109982370.1	helix-turn-helix domain-containing protein	-
DLJ51_RS00940 (DLJ51_00940)	comYH	157411..158364 (+)	954	WP_019771347.1	class I SAM-dependent methyltransferase	Machinery gene
DLJ51_RS00945 (DLJ51_00945)	-	158427..159623 (+)	1197	WP_019771614.1	acetate kinase	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12196.32 Da
• Isoelectric Point: 10.1213

>NTDB_id=293559 DLJ51_RS00900 WP_019770073.1 154743..155069(+) (comYC) [Streptococcus sobrinus strain NIDR 6715-7]
MMKKFLKRLKGKKVKAFTLIEMLVVLLIISVLLLLFVPNLAKQKDKVKDTGGSAVVKVVESQAELYELNHSDDATVSKLV
SDGDITQKQADSYNDYYKKHKESRNVPN

Nucleotide

• Length: 327 bp

>NTDB_id=293559 DLJ51_RS00900 WP_019770073.1 154743..155069(+) (comYC) [Streptococcus sobrinus strain NIDR 6715-7]
ATGATGAAAAAATTTCTCAAACGCCTAAAAGGCAAGAAGGTCAAAGCCTTCACCCTGATTGAAATGCTGGTCGTGCTACT
GATTATCAGCGTTTTGCTCCTGCTCTTTGTCCCCAATTTGGCCAAGCAAAAGGATAAGGTCAAGGATACTGGCGGTTCAG
CCGTTGTCAAGGTGGTGGAAAGTCAGGCGGAACTCTATGAACTCAATCATAGCGATGATGCCACGGTATCAAAACTAGTT
TCTGATGGTGACATCACCCAAAAACAGGCGGATTCTTACAATGATTATTACAAGAAACATAAGGAAAGTCGCAACGTTCC
GAACTAG

Domains

Predicted by InterProScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (12-35)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus mutans UA140	75.962	96.296	0.731
comYC	Streptococcus mutans UA159	75.962	96.296	0.731
comYC	Streptococcus gordonii str. Challis substr. CH1	68.571	97.222	0.667
comGC/cglC	Streptococcus mitis SK321	68.687	91.667	0.63
comGC/cglC	Streptococcus mitis NCTC 12261	63.551	99.074	0.63
comGC/cglC	Streptococcus pneumoniae TIGR4	64.646	91.667	0.593
comGC/cglC	Streptococcus pneumoniae Rx1	64.646	91.667	0.593
comGC/cglC	Streptococcus pneumoniae D39	64.646	91.667	0.593
comGC/cglC	Streptococcus pneumoniae R6	64.646	91.667	0.593
comGC	Lactococcus lactis subsp. cremoris KW2	62.376	93.519	0.583
comYC	Streptococcus suis isolate S10	63.636	81.481	0.519
comGC	Staphylococcus aureus MW2	50.562	82.407	0.417
comGC	Staphylococcus aureus N315	50.562	82.407	0.417