Detailed information
Bioinformatically predicted
Overview
| Name | comX | Type | Regulator |
| Locus tag | DLJ52_RS00505 | Genome accession | NZ_CP029559 |
| Coordinates | 83502..84125 (+) | Length | 207 a.a. |
| NCBI ID | WP_002962720.1 | Uniprot ID | U2IUC9 |
| Organism | Streptococcus sobrinus strain NIDR 6715-15 | ||
| Function | activation of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 78502..89125
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DLJ52_RS00505 (DLJ52_00505) | comX | 83502..84125 (+) | 624 | WP_002962720.1 | sigma-70 family RNA polymerase sigma factor | Regulator |
| DLJ52_RS00510 (DLJ52_00510) | rplM | 84422..84868 (+) | 447 | WP_002962718.1 | 50S ribosomal protein L13 | - |
| DLJ52_RS00515 (DLJ52_00515) | rpsI | 84888..85280 (+) | 393 | WP_019775615.1 | 30S ribosomal protein S9 | - |
| DLJ52_RS00520 (DLJ52_00520) | ruvB | 85554..86552 (+) | 999 | WP_019769254.1 | Holliday junction branch migration DNA helicase RuvB | - |
| DLJ52_RS00525 (DLJ52_00525) | - | 86597..87022 (+) | 426 | WP_002962714.1 | low molecular weight protein-tyrosine-phosphatase | - |
| DLJ52_RS00530 (DLJ52_00530) | - | 87001..87435 (+) | 435 | WP_002962711.1 | MORN repeat-containing protein | - |
Sequence
Protein
Download Length: 207 a.a. Molecular weight: 24561.19 Da Isoelectric Point: 4.8066
>NTDB_id=293498 DLJ52_RS00505 WP_002962720.1 83502..84125(+) (comX) [Streptococcus sobrinus strain NIDR 6715-15]
MDKEKLKEIFNKHSALPEEVEEFDDGMVKEVITAGLLFCLKEVLDMDDSSFVSAFSRVEKTVSKLAKDYYIKLWTYDDWR
QEARIILYQLLERFPDLANDEEKLRIYFKTKFRSYVLDNIRKQESQKRAFDRMIYEEISELGHMIPSQQMDTADYCALKE
KLKELKQKLAPEDYAKILLLMRGGAFKGRSAFIKDIKVEFEDFDEDN
MDKEKLKEIFNKHSALPEEVEEFDDGMVKEVITAGLLFCLKEVLDMDDSSFVSAFSRVEKTVSKLAKDYYIKLWTYDDWR
QEARIILYQLLERFPDLANDEEKLRIYFKTKFRSYVLDNIRKQESQKRAFDRMIYEEISELGHMIPSQQMDTADYCALKE
KLKELKQKLAPEDYAKILLLMRGGAFKGRSAFIKDIKVEFEDFDEDN
Nucleotide
Download Length: 624 bp
>NTDB_id=293498 DLJ52_RS00505 WP_002962720.1 83502..84125(+) (comX) [Streptococcus sobrinus strain NIDR 6715-15]
ATGGACAAAGAAAAACTCAAGGAAATTTTTAACAAACATTCTGCCTTACCAGAAGAAGTTGAAGAGTTTGATGATGGTAT
GGTCAAAGAAGTCATTACCGCTGGTTTATTATTTTGTTTGAAAGAGGTATTGGATATGGATGATTCTTCATTTGTAAGTG
CATTTAGCCGTGTTGAAAAGACTGTTAGCAAACTAGCTAAAGATTATTATATTAAATTATGGACCTATGATGACTGGAGG
CAGGAGGCACGAATTATCCTTTATCAGTTATTGGAGCGATTTCCAGATTTGGCCAATGATGAAGAAAAGTTACGAATCTA
TTTTAAAACAAAGTTCAGAAGTTATGTCCTTGATAATATTCGCAAGCAGGAAAGTCAAAAACGCGCTTTTGACAGGATGA
TTTACGAGGAAATTTCTGAATTAGGTCATATGATTCCTAGTCAGCAGATGGACACAGCTGATTATTGTGCCCTTAAGGAA
AAGCTAAAGGAACTTAAGCAGAAATTGGCTCCTGAGGATTATGCCAAAATTCTATTGCTGATGCGAGGTGGTGCATTCAA
AGGGAGAAGTGCCTTTATCAAGGATATTAAGGTTGAATTCGAAGATTTTGACGAGGACAACTAA
ATGGACAAAGAAAAACTCAAGGAAATTTTTAACAAACATTCTGCCTTACCAGAAGAAGTTGAAGAGTTTGATGATGGTAT
GGTCAAAGAAGTCATTACCGCTGGTTTATTATTTTGTTTGAAAGAGGTATTGGATATGGATGATTCTTCATTTGTAAGTG
CATTTAGCCGTGTTGAAAAGACTGTTAGCAAACTAGCTAAAGATTATTATATTAAATTATGGACCTATGATGACTGGAGG
CAGGAGGCACGAATTATCCTTTATCAGTTATTGGAGCGATTTCCAGATTTGGCCAATGATGAAGAAAAGTTACGAATCTA
TTTTAAAACAAAGTTCAGAAGTTATGTCCTTGATAATATTCGCAAGCAGGAAAGTCAAAAACGCGCTTTTGACAGGATGA
TTTACGAGGAAATTTCTGAATTAGGTCATATGATTCCTAGTCAGCAGATGGACACAGCTGATTATTGTGCCCTTAAGGAA
AAGCTAAAGGAACTTAAGCAGAAATTGGCTCCTGAGGATTATGCCAAAATTCTATTGCTGATGCGAGGTGGTGCATTCAA
AGGGAGAAGTGCCTTTATCAAGGATATTAAGGTTGAATTCGAAGATTTTGACGAGGACAACTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX | Streptococcus sobrinus strain NIDR 6715-7 |
100 |
100 |
1 |