Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   DKK89_RS03140 Genome accession   NZ_CP029474
Coordinates   580200..581087 (-) Length   295 a.a.
NCBI ID   WP_000143425.1    Uniprot ID   A0A389PV50
Organism   Staphylococcus aureus strain USA 100 isolate 30-47     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 575200..586087
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DKK89_RS03105 (DKK89_03105) - 575219..575311 (+) 93 WP_010956583.1 hypothetical protein -
  DKK89_RS03110 (DKK89_03110) - 575419..575916 (-) 498 WP_001065268.1 glutathione peroxidase -
  DKK89_RS03115 (DKK89_03115) - 575926..576186 (-) 261 WP_001791974.1 hypothetical protein -
  DKK89_RS03125 (DKK89_03125) - 576568..576681 (-) 114 Protein_583 hypothetical protein -
  DKK89_RS03130 (DKK89_03130) - 577340..579340 (-) 2001 WP_000776750.1 ABC transporter permease -
  DKK89_RS03135 (DKK89_03135) - 579337..580092 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  DKK89_RS03140 (DKK89_03140) braS 580200..581087 (-) 888 WP_000143425.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  DKK89_RS03145 (DKK89_03145) braR 581098..581763 (-) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  DKK89_RS03150 (DKK89_03150) - 581789..581989 (-) 201 WP_000604730.1 hypothetical protein -
  DKK89_RS03155 (DKK89_03155) - 582187..583611 (+) 1425 WP_000953755.1 alkaline phosphatase -
  DKK89_RS14370 - 583681..583791 (+) 111 Protein_590 hypothetical protein -
  DKK89_RS03165 (DKK89_03165) - 583894..584349 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  DKK89_RS03170 (DKK89_03170) - 584594..585355 (-) 762 WP_000323441.1 alpha/beta hydrolase family protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34006.28 Da        Isoelectric Point: 6.0874

>NTDB_id=292977 DKK89_RS03140 WP_000143425.1 580200..581087(-) (braS) [Staphylococcus aureus strain USA 100 isolate 30-47]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLETALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLHVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=292977 DKK89_RS03140 WP_000143425.1 580200..581087(-) (braS) [Staphylococcus aureus strain USA 100 isolate 30-47]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAACTGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTTAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTACACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGCCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACACACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A389PV50

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment