Detailed information NTG0292891

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: EQI27_RS14115
• Genome accession: NZ_CP035163
• Coordinates: 2692274..2693539 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103923
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2687274..2698539

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQI27_RS14095 (EQI27_14095)	yrrB	2688645..2689265 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
EQI27_RS14100 (EQI27_14100)	mnmA	2689351..2690466 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
EQI27_RS14105 (EQI27_14105)	iscSA	2690497..2691636 (-)	1140	WP_041850172.1	cysteine desulfurase family protein	-
EQI27_RS14110 (EQI27_14110)	cymR	2691655..2692071 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
EQI27_RS14115 (EQI27_14115)	rarA	2692274..2693539 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
EQI27_RS14120 (EQI27_14120)	tcdA	2693579..2694343 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
EQI27_RS14130 (EQI27_14130)	aspS	2694678..2696456 (-)	1779	WP_015714438.1	aspartate--tRNA ligase	-
EQI27_RS14135 (EQI27_14135)	hisS	2696470..2697744 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
EQI27_RS14140 (EQI27_14140)	yrzK	2698126..2698296 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=292891 EQI27_RS14115 WP_014480427.1 2692274..2693539(+) (rarA) [Bacillus subtilis strain SRCM103923]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=292891 EQI27_RS14115 WP_014480427.1 2692274..2693539(+) (rarA) [Bacillus subtilis strain SRCM103923]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993