Detailed information NTG0291997

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: DIC78_RS17880
• Genome accession: NZ_CP029364
• Coordinates: 3488873..3491269 (+)
• Length: 798 a.a.
• NCBI ID: WP_127696706.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain ZB201702
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3483873..3496269

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DIC78_RS17855 (DIC78_17880)	-	3483954..3485219 (-)	1266	WP_127696705.1	replication-associated recombination protein A	-
DIC78_RS17860 (DIC78_17885)	cymR	3485421..3485837 (+)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
DIC78_RS17865 (DIC78_17890)	-	3485857..3486999 (+)	1143	WP_103672584.1	cysteine desulfurase family protein	-
DIC78_RS17870 (DIC78_17895)	mnmA	3487028..3488143 (+)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
DIC78_RS17875 (DIC78_17900)	-	3488228..3488848 (+)	621	WP_081638347.1	tetratricopeptide repeat protein	-
DIC78_RS17880 (DIC78_17905)	recD2	3488873..3491269 (+)	2397	WP_127696706.1	ATP-dependent RecD-like DNA helicase	Machinery gene
DIC78_RS17885 (DIC78_17910)	-	3491328..3491852 (+)	525	WP_106022554.1	PRC-barrel domain-containing protein	-
DIC78_RS17890 (DIC78_17915)	-	3491864..3492055 (+)	192	WP_010335110.1	hypothetical protein	-
DIC78_RS17895 (DIC78_17920)	-	3492077..3492208 (+)	132	WP_024122308.1	YrzQ family protein	-
DIC78_RS17900 (DIC78_17925)	-	3492242..3492898 (-)	657	WP_127696707.1	amino acid ABC transporter permease	-
DIC78_RS17905 (DIC78_17930)	-	3492915..3493565 (-)	651	WP_024122306.1	amino acid ABC transporter permease	-
DIC78_RS17910 (DIC78_17935)	-	3493629..3494450 (-)	822	WP_024122305.1	transporter substrate-binding domain-containing protein	-
DIC78_RS17915 (DIC78_17940)	-	3494473..3495201 (-)	729	WP_024122304.1	amino acid ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 89022.61 Da
• Isoelectric Point: 5.0274

>NTDB_id=291997 DIC78_RS17880 WP_127696706.1 3488873..3491269(+) (recD2) [Bacillus halotolerans strain ZB201702]
MQQHPDQLKMEEEPFLKGTVNTVIYHNDANLYTVLKVKVRETSEAIEDKVVSVTGYFPALQEEETYTFYGKTVTHPKFGL
QFQAEHFKKEIPTTKEGVIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADSSVLYDVPRLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVRDVEGIGFGKADELGGRMGLSGNHPERIKAAILYTLETT
CLSEGHTYIETKQLIIETQTLLNQSAADGQRITEMDAANAMIALGENKDIVIEDERCYFPSLFFAEQNVAKRVKQIASQT
EYDDQFPESEFLLALGELEERMNVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGASLDPSDYKKD
EAFPIVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDQPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHEMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPKEKRREIKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSAQAAEMDAELAALQKELPFSVHDANIGMEGITPFDFMKEEQL

Nucleotide

• Length: 2397 bp

>NTDB_id=291997 DIC78_RS17880 WP_127696706.1 3488873..3491269(+) (recD2) [Bacillus halotolerans strain ZB201702]
GTGCAGCAGCACCCGGATCAGCTGAAAATGGAGGAGGAGCCCTTTTTAAAAGGGACAGTAAACACCGTCATTTATCACAA
TGACGCCAATTTATATACGGTTCTGAAAGTGAAAGTCAGAGAGACCTCCGAAGCTATTGAAGATAAAGTCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAAACCGTTACTCACCCAAAGTTCGGACTG
CAATTTCAAGCTGAGCATTTCAAAAAGGAGATCCCGACAACAAAAGAAGGTGTCATTCAGTATTTGTCGAGCGATCTGTT
TGAAGGAATCGGTAAAAAAACCGCTGAAGAGATTGTAAAAAAACTGGGTGACAGTGCGATTAATAAAATTTTGGCTGATT
CTTCAGTCCTTTATGATGTTCCGAGACTGTCAAAAAAGAAAGCTGACACCCTTGCCGGTGCTTTGCAGCGGCATCAGGGA
CTGGAGCAAATTATGATTTCGCTGAATCAATTTGGGTTCGGCCCTCAGCTGTCTATGAAAATCTATCAGGCCTATGAATC
CGAGACGCTTGAGAAAATTCAGGAAAACCCTTATCAGCTTGTGAGAGACGTGGAAGGCATAGGCTTTGGAAAAGCAGATG
AGCTTGGCGGAAGAATGGGGCTCTCAGGGAATCATCCTGAGCGGATAAAAGCGGCTATTTTGTACACGCTTGAAACGACA
TGCCTTTCAGAAGGGCATACGTACATAGAAACGAAGCAGCTGATTATCGAAACCCAAACGCTGTTAAATCAGTCAGCGGC
AGATGGACAGCGCATTACAGAAATGGATGCCGCTAATGCAATGATTGCGCTTGGAGAGAATAAGGATATTGTCATTGAAG
ATGAACGATGTTACTTTCCGTCGCTGTTTTTCGCTGAACAAAATGTTGCAAAGCGTGTGAAACAGATCGCAAGCCAAACC
GAATATGACGACCAGTTTCCTGAATCAGAATTCCTTCTGGCTTTAGGGGAATTGGAAGAGCGTATGAATGTTCAGTACGC
GCCGAGTCAGAAGGAAGCGATACAAAAAGCGCTGTCGTCACCGATGCTTCTTTTAACGGGAGGGCCGGGTACCGGTAAAA
CAACGGTCATCAGAGGCATTGTGGAATTGTATGGAGAACTCCACGGTGCTTCGCTTGATCCGTCGGATTATAAAAAAGAT
GAAGCCTTTCCGATTGTGCTGGCCGCGCCTACAGGTAGAGCGGCGAAACGAATGAGTGAGTCAACGGGTCTTCCGGCGGT
TACGATACATCGGCTGCTCGGCTGGAACGGCGCGGAAGGATTTACTCATACAGAGGACCAGCCGATTGAAGGGAAGCTTT
TGATTATCGATGAAGCGAGTATGCTCGATATATGGCTTGCGAATCATTTGTTCAAAGCGATCCCTGACCATATTCAAATC
ATCATTGTCGGAGACGAAGACCAGCTGCCTTCCGTCGGACCCGGTCAAGTGCTCAGAGACCTTTTGGCATCCCAGGTGAT
TCCGACCGTAAGACTGACAGACATCTATCGGCAAGCGGAAGGATCGTCGATTGTCGAGCTTGCCCACGAGATGAAAAACG
GGCTGCTTCCGAACAACCTGACGGCCCCGACAAAGGATCGTTCCTTTATTCGCTGCGGTGGTTCGCAAATTAAAGAAGTG
GTTGAGAAGGTTGTCGCGAATGCATTGAAAAAAGGATATACGGCAAAAGATATTCAGGTCCTCGCACCGATGTACAGAGG
GAAAGCCGGAATCAATGAGCTGAATGTGATGTTGCAGGATATTTTAAACCCTCCAAAAGAAAAGCGGAGGGAAATTAAGT
TCGGTGACGTTGTCTATAGAACCGGGGATAAAATTTTGCAGCTTGTCAATCAGCCGGAAAACAATGTGTTTAACGGCGAT
ATTGGAGAAATCACTTCCATTTTCTACGCGAAGGAAAATACAGAAAAAGAAGACATGGCTGTTGTCTCTTTTGACGGCAA
TGAAATGACATTTACGAAAAAAGACTTCAGTCAGTTTACTCATGCGTATTGCTGCTCTATTCATAAATCGCAGGGCAGTG
AATTTCCGATCGTGGTTCTTCCTGTAGTGAAGGGCTACTATAGAATGCTCAGAAGAAACCTTCTATATACTGCCATCACG
AGGGCGAAGAAATTTCTCATTTTATGCGGGGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAATGACGCGACTGTCAG
ACAGACCTCATTAAAAAACAGGCTGTCAGCGCAGGCGGCTGAAATGGATGCTGAGCTGGCGGCTTTGCAAAAAGAGCTCC
CGTTCAGCGTGCACGACGCAAATATCGGAATGGAAGGCATTACGCCATTCGATTTTATGAAAGAAGAACAGCTGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• AAA domain (AAA_30) (346-553)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	95.985	99.875	0.959