Detailed information NTG0291900

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: DIW83_RS10335
• Genome accession: NZ_CP029351
• Coordinates: 2114762..2115577 (-)
• Length: 271 a.a.
• NCBI ID: WP_016804843.1
• Uniprot ID: A0A2L1VGT9
• Organism: Acinetobacter nosocomialis strain NCTC 8102
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2109762..2120577

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DIW83_RS10305 (DIW83_10305)	-	2110072..2110512 (-)	441	WP_002050033.1	SRPBCC family protein	-
DIW83_RS10310 (DIW83_10310)	tadA	2110582..2111085 (-)	504	WP_031944625.1	tRNA adenosine(34) deaminase TadA	-
DIW83_RS10315 (DIW83_10315)	-	2111092..2112216 (-)	1125	WP_006580787.1	enoyl-CoA hydratase/isomerase family protein	-
DIW83_RS10320 (DIW83_10320)	ung	2112213..2112926 (-)	714	WP_002049829.1	uracil-DNA glycosylase	-
DIW83_RS10325 (DIW83_10325)	-	2112977..2113573 (-)	597	WP_016804842.1	6-pyruvoyl trahydropterin synthase family protein	-
DIW83_RS10330 (DIW83_10330)	gspK	2113803..2114762 (-)	960	WP_017398262.1	type II secretion system minor pseudopilin GspK	-
DIW83_RS10335 (DIW83_10335)	xcpW	2114762..2115577 (-)	816	WP_016804843.1	type II secretion system minor pseudopilin GspJ	Machinery gene
DIW83_RS10340 (DIW83_10340)	xcpV	2115577..2115957 (-)	381	WP_016804844.1	type II secretion system minor pseudopilin GspI	Machinery gene
DIW83_RS10345 (DIW83_10345)	-	2115947..2116498 (-)	552	WP_016804845.1	type II secretion system protein	-
DIW83_RS10350 (DIW83_10350)	-	2116508..2117116 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
DIW83_RS10355 (DIW83_10355)	-	2117154..2117927 (-)	774	WP_004709116.1	TatD family hydrolase	-
DIW83_RS10360 (DIW83_10360)	-	2117945..2118286 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
DIW83_RS10365 (DIW83_10365)	-	2118298..2119278 (-)	981	WP_016804846.1	DNA polymerase III subunit delta'	-
DIW83_RS10370 (DIW83_10370)	kdsB	2119290..2120051 (-)	762	WP_016804847.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30739.09 Da
• Isoelectric Point: 9.9903

>NTDB_id=291900 DIW83_RS10335 WP_016804843.1 2114762..2115577(-) (xcpW) [Acinetobacter nosocomialis strain NCTC 8102]
MIKNKNFRIQSIASHLRAQSGVIPTDYSGHSSSSYAQTKLRFREPHTRNMVSRLAARSSNARLTRASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQILRDSLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDADQKKLYRLKYTNLNTSNNEQPLSSTLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKSNELKKLPKG
IKIQLTVAGVSYEWIYSLNQSNLSLSPHGGS

Nucleotide

• Length: 816 bp

>NTDB_id=291900 DIW83_RS10335 WP_016804843.1 2114762..2115577(-) (xcpW) [Acinetobacter nosocomialis strain NCTC 8102]
ATGATAAAAAATAAGAATTTTCGAATTCAAAGCATTGCTTCTCATCTTAGAGCTCAGTCGGGTGTTATTCCGACTGACTA
CTCTGGGCATAGCTCTTCGTCTTACGCTCAGACAAAGCTTCGCTTTAGAGAGCCTCACACTCGAAACATGGTTTCTCGTC
TTGCGGCGCGATCGAGCAATGCTCGATTAACTCGCGCCTCAGGATTTACGTTGGTTGAATTGTTAGTTGCGATTGCTATC
TTTGCGGTCTTATCTTTATTGGGGTGGAAAATTTTCGATTACTTGCTTAAAGTTCGTGACCGTAATGCTGAACATGAAGT
ACATTTGTTTGAGTTACAAGATGCTTATCAACAAATTCTTCGTGATAGTCTGCAAATTATTCCTTTATCTGCAAATCAAG
GTGGTCAACTTCATCCAGCTTTAGAAATTGATAATCAAATTCTGCGTTTTAGCAAAGCAGGTGTAACGGATCCTTTAAAA
CAAGGTTTATCACCGTTTGAACGAATTGAATATCGTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAA
TTTGAATACTTCGAATAATGAGCAACCTTTATCGAGTACCTTGCTAAGTCAGGTTGACCAATATCAGATTATGGTTTTGA
CTCCGCAAGAGGTAACAAAGTGGCCTGAGGTTAATATTGATCCAACAAAGTCTAACGAATTGAAAAAATTACCGAAAGGA
ATAAAAATTCAACTTACTGTAGCAGGAGTAAGTTATGAATGGATCTATAGCTTAAATCAAAGTAATTTATCGCTTTCCCC
ACATGGTGGCTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

3D structure

• AlphaFold DB: A0A2L1VGT9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	93.805	83.395	0.782