Detailed information NTG0287802

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: CDG57_RS07280
• Genome accession: NZ_CP028800
• Coordinates: 1494477..1495109 (+)
• Length: 210 a.a.
• NCBI ID: WP_042891053.1
• Uniprot ID: -
• Organism: Acinetobacter junii strain WCHAJ59
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1489477..1500109

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CDG57_RS07245 (CDG57_07260)	kdsB	1489573..1490334 (+)	762	WP_039047964.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
CDG57_RS07250 (CDG57_07265)	-	1490336..1491322 (+)	987	WP_042891020.1	DNA polymerase III subunit delta'	-
CDG57_RS07255 (CDG57_07270)	-	1491549..1491893 (+)	345	WP_005402539.1	PilZ domain-containing protein	-
CDG57_RS07260 (CDG57_07275)	-	1491916..1492689 (+)	774	WP_039047966.1	TatD family hydrolase	-
CDG57_RS07265 (CDG57_07280)	-	1492728..1493336 (+)	609	WP_017397517.1	TetR/AcrR family transcriptional regulator	-
CDG57_RS07270 (CDG57_07285)	-	1493349..1493897 (+)	549	WP_042891024.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
CDG57_RS07275 (CDG57_07290)	xcpV	1493911..1494384 (+)	474	WP_080747888.1	type II secretion system minor pseudopilin GspI	Machinery gene
CDG57_RS07280 (CDG57_07295)	xcpW	1494477..1495109 (+)	633	WP_042891053.1	type II secretion system minor pseudopilin GspJ	Machinery gene
CDG57_RS07285 (CDG57_07300)	gspK	1495106..1496065 (+)	960	WP_087539682.1	type II secretion system minor pseudopilin GspK	-
CDG57_RS07290 (CDG57_07305)	-	1496172..1496768 (+)	597	WP_004954093.1	6-pyruvoyl trahydropterin synthase family protein	-
CDG57_RS07295 (CDG57_07310)	ung	1496807..1497520 (+)	714	WP_087539684.1	uracil-DNA glycosylase	-
CDG57_RS07300 (CDG57_07315)	-	1497517..1498641 (+)	1125	WP_171425366.1	enoyl-CoA hydratase/isomerase family protein	-
CDG57_RS07305 (CDG57_07320)	tadA	1498648..1499151 (+)	504	WP_087539688.1	tRNA adenosine(34) deaminase TadA	-
CDG57_RS07310 (CDG57_07325)	-	1499218..1499658 (+)	441	WP_087539710.1	SRPBCC family protein	-

Sequence

Protein

• Length: 210 a.a.
• Molecular weight: 24178.70 Da
• Isoelectric Point: 5.8162

>NTDB_id=287802 CDG57_RS07280 WP_042891053.1 1494477..1495109(+) (xcpW) [Acinetobacter junii strain WCHAJ59]
MKSNLGFTLVELLVAIAIFAVLSMLGWKVFDYLIKVKDRNAEHETHLFELQDAYQQFLKDSMQIIPLTANDGRQLQAAMV
LNDRSFSFSKAGVSDPLKQGLSPYERTEYRYDAQQKKVYRLKYTNLNIPNRVQPVSSTLLENVDQFRILILNPQEISQWP
ENINDPNNVNELKKLPLGFKVQLTIAGSDYEWIYSLLNANQLLVNQETPP

Nucleotide

• Length: 633 bp

>NTDB_id=287802 CDG57_RS07280 WP_042891053.1 1494477..1495109(+) (xcpW) [Acinetobacter junii strain WCHAJ59]
ATTAAGAGTAATTTAGGTTTTACTTTAGTTGAGTTGCTTGTTGCGATTGCGATTTTTGCAGTGCTTTCAATGTTGGGGTG
GAAAGTTTTTGATTATCTCATCAAAGTGAAAGATAGAAATGCAGAACATGAAACACACTTATTTGAATTACAGGATGCTT
ATCAGCAATTTCTAAAAGATAGTATGCAGATAATTCCATTGACTGCAAATGATGGGCGACAATTACAAGCAGCTATGGTT
TTGAATGATCGAAGTTTTAGTTTTAGTAAGGCTGGGGTATCTGATCCATTGAAGCAAGGTCTTTCACCATATGAGCGAAC
AGAATACAGATATGATGCACAACAAAAAAAAGTTTACCGTTTGAAATATACAAATTTAAATATTCCAAATCGTGTGCAAC
CAGTATCAAGCACTTTACTTGAAAATGTAGATCAATTTAGAATTTTGATTTTAAATCCACAAGAAATTAGCCAATGGCCT
GAAAATATTAATGATCCAAATAATGTAAATGAATTAAAGAAGTTACCATTAGGTTTTAAAGTTCAATTGACGATTGCTGG
TTCAGATTATGAGTGGATTTATAGTTTATTAAATGCCAATCAGTTATTGGTCAATCAGGAAACTCCACCATGA

Domains

Predicted by InterProScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-25)

• Type II secretion system (T2SS), protein J (T2SSJ) (59-187)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	69.802	96.19	0.671