Detailed information NTG0028604

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: SHEW185_RS16255
• Genome accession: NC_009665
• Coordinates: 3727830..3728897 (-)
• Length: 355 a.a.
• NCBI ID: WP_011847432.1
• Uniprot ID: A3D785
• Organism: Shewanella baltica OS185
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3722830..3733897

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SHEW185_RS16240 (Shew185_3123)	-	3723109..3724365 (-)	1257	WP_012089804.1	aspartate kinase	-
SHEW185_RS16245 (Shew185_3124)	alaS	3724375..3726999 (-)	2625	WP_012089805.1	alanine--tRNA ligase	-
SHEW185_RS16250 (Shew185_3125)	-	3727342..3727812 (-)	471	WP_375164024.1	regulatory protein RecX	-
SHEW185_RS16255 (Shew185_3126)	recA	3727830..3728897 (-)	1068	WP_011847432.1	recombinase RecA	Machinery gene
SHEW185_RS16260 (Shew185_3127)	mutS	3729282..3731852 (+)	2571	WP_012089807.1	DNA mismatch repair protein MutS	-
SHEW185_RS16265 (Shew185_3128)	rpoS	3732056..3733036 (-)	981	WP_006086853.1	RNA polymerase sigma factor RpoS	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 37898.44 Da
• Isoelectric Point: 5.0504

>NTDB_id=28604 SHEW185_RS16255 WP_011847432.1 3727830..3728897(-) (recA) [Shewanella baltica OS185]
MKVDPNKEKALAAVLIQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGRIVEIYGPESSGKTTLTLEV
IAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVG
NETRVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQGRANAGKYLTENPAIATEI
DKTLRELLLSNPSALAAKADASTEDNVDLETGEVF

Nucleotide

• Length: 1068 bp

>NTDB_id=28604 SHEW185_RS16255 WP_011847432.1 3727830..3728897(-) (recA) [Shewanella baltica OS185]
ATGAAGGTCGATCCAAATAAAGAGAAAGCACTTGCTGCGGTATTGATCCAAATTGAGAAACAATTTGGTAAAGGCTCCAT
CATGAAGCTGGGTGAAGATCGCTCTATGGATGTTGAGACCATTTCTACCGGTTCTCTATCTCTGGACGTTGCTTTAGGCG
CTGGCGGTTTGCCAATGGGTCGTATCGTTGAGATCTATGGTCCTGAATCATCAGGTAAAACGACACTGACTTTAGAAGTG
ATTGCCGCAGCGCAACGTGAAGGTAAAACCTGTGCCTTTATCGATGCAGAGCATGCACTCGACCCTATCTATGCTAAAAA
ATTGGGCGTAGATATTGATAACCTGCTGTGTTCACAACCGGATACCGGCGAGCAAGCGCTTGAGATTTGTGATGCTTTAA
CTCGCTCAGGCGCTGTTGACGTTATCGTCGTCGACTCAGTGGCGGCATTAACGCCTAAAGCTGAAATCGAAGGTGAAATT
GGTGATTCTCACATGGGCCTAGCGGCACGTATGATGAGCCAAGCCATGCGTAAACTTGCGGGTAACTTAAAGCAATCTAA
CACCTTACTTATCTTCATCAACCAAATCCGGATGAAGATTGGTGTGATGTTTGGTAACCCAGAAACGACAACCGGTGGTA
ACGCGCTGAAGTTCTATGCTTCTGTTCGTTTAGACATTCGTCGTACTGGTGCCATTAAAGACGGCGATGAAGTTGTCGGT
AACGAAACTCGCGTTAAAGTGGTGAAAAACAAGGTTGCAGCACCGTTCAAGCAAGCCGAATTCCAAATCCTTTATGGCCA
AGGTATTAACCGTACTGGTGAGTTAGTTGACTTAGGCGTAGCCCATAAGTTGATTGAAAAAGCGGGTGCTTGGTACAGTT
ATAAAGGCGATAAAATCGGTCAAGGCCGTGCTAATGCGGGTAAATATTTGACTGAAAACCCAGCCATTGCTACTGAAATT
GACAAGACATTACGTGAGTTACTTTTGAGCAATCCTAGTGCACTGGCTGCCAAAGCTGATGCGAGCACGGAAGATAATGT
TGATTTAGAAACAGGCGAAGTATTCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

3D structure

• AlphaFold DB: A3D785

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	81.25	99.155	0.806
recA	Vibrio cholerae O1 biovar El Tor strain E7946	81.25	99.155	0.806
recA	Pseudomonas stutzeri DSM 10701	72.254	97.465	0.704
recA	Acinetobacter baylyi ADP1	70.317	97.746	0.687
recA	Acinetobacter baumannii D1279779	68.768	98.31	0.676
recA	Glaesserella parasuis strain SC1401	68.571	98.592	0.676
recA	Ralstonia pseudosolanacearum GMI1000	69.207	92.394	0.639
recA	Neisseria gonorrhoeae MS11	69.659	90.986	0.634
recA	Neisseria gonorrhoeae MS11	69.659	90.986	0.634
recA	Neisseria gonorrhoeae strain FA1090	69.659	90.986	0.634
recA	Streptococcus pneumoniae TIGR4	63.72	92.394	0.589
recA	Streptococcus pneumoniae R6	63.72	92.394	0.589
recA	Streptococcus pneumoniae D39	63.72	92.394	0.589
recA	Streptococcus pneumoniae Rx1	63.72	92.394	0.589
recA	Streptococcus mitis NCTC 12261	63.11	92.394	0.583
recA	Streptococcus mitis SK321	62.805	92.394	0.58
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.562	93.803	0.577
recA	Streptococcus pyogenes NZ131	61.89	92.394	0.572
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.346	91.268	0.569
recA	Streptococcus mutans UA159	61.585	92.394	0.569
recA	Bacillus subtilis subsp. subtilis str. 168	62.617	90.423	0.566
recA	Helicobacter pylori strain NCTC11637	60.542	93.521	0.566
recA	Helicobacter pylori 26695	60.241	93.521	0.563
recA	Lactococcus lactis subsp. cremoris KW2	60.061	92.394	0.555
recA	Latilactobacillus sakei subsp. sakei 23K	61.755	89.859	0.555
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.27	88.732	0.544