Detailed information
Bioinformatically predicted
Overview
| Name | comL/pilP | Type | Machinery gene |
| Locus tag | EGV94_RS29080 | Genome accession | NZ_CP033685 |
| Coordinates | 6104370..6104894 (-) | Length | 174 a.a. |
| NCBI ID | WP_003116136.1 | Uniprot ID | A0A0H2ZIN8 |
| Organism | Pseudomonas aeruginosa strain H26023 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6099370..6109894
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGV94_RS29065 (EGV94_29000) | aroB | 6100498..6101604 (-) | 1107 | WP_003107839.1 | 3-dehydroquinate synthase | - |
| EGV94_RS29070 (EGV94_29005) | aroK | 6101654..6102172 (-) | 519 | WP_003095833.1 | shikimate kinase AroK | - |
| EGV94_RS29075 (EGV94_29010) | pilQ | 6102184..6104316 (-) | 2133 | WP_003141780.1 | type 4a pilus secretin PilQ | Machinery gene |
| EGV94_RS29080 (EGV94_29015) | comL/pilP | 6104370..6104894 (-) | 525 | WP_003116136.1 | type 4a pilus biogenesis lipoprotein PilP | Machinery gene |
| EGV94_RS29085 (EGV94_29020) | pilO | 6104891..6105514 (-) | 624 | WP_003116135.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| EGV94_RS29090 (EGV94_29025) | pilN | 6105511..6106107 (-) | 597 | WP_003141783.1 | type 4a pilus biogenesis protein PilN | - |
| EGV94_RS29095 (EGV94_29030) | pilM | 6106107..6107171 (-) | 1065 | WP_003110888.1 | type IV pilus assembly protein PilM | Machinery gene |
| EGV94_RS29100 (EGV94_29035) | - | 6107356..6109827 (+) | 2472 | WP_003141786.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 19224.07 Da Isoelectric Point: 9.7252
>NTDB_id=284273 EGV94_RS29080 WP_003116136.1 6104370..6104894(-) (comL/pilP) [Pseudomonas aeruginosa strain H26023]
MRARLILSSLLLTMLAGCGANSEFGDLQAYMNEVRARPKGNIEPLPKFQPYEAFTYSASNLRSPFQPPVKIDLTVRQKGN
KVVKPDETRVKQFLEGFNIETFEMVGTLSNAQGTFALVKGAGGVHRVRVGDYLGRNDGKVVGISEGKIDVIEIVPDGEGN
WLERPRSLTLKERS
MRARLILSSLLLTMLAGCGANSEFGDLQAYMNEVRARPKGNIEPLPKFQPYEAFTYSASNLRSPFQPPVKIDLTVRQKGN
KVVKPDETRVKQFLEGFNIETFEMVGTLSNAQGTFALVKGAGGVHRVRVGDYLGRNDGKVVGISEGKIDVIEIVPDGEGN
WLERPRSLTLKERS
Nucleotide
Download Length: 525 bp
>NTDB_id=284273 EGV94_RS29080 WP_003116136.1 6104370..6104894(-) (comL/pilP) [Pseudomonas aeruginosa strain H26023]
ATGAGAGCCCGCCTGATTCTGAGCAGCTTGCTGCTCACCATGCTTGCCGGTTGCGGCGCGAATTCCGAGTTCGGCGATCT
TCAAGCCTATATGAACGAGGTACGTGCTCGACCTAAGGGCAATATCGAGCCTCTGCCGAAGTTTCAGCCATATGAAGCTT
TTACTTATAGCGCTTCGAACCTGCGTAGTCCGTTCCAGCCGCCGGTGAAGATCGACCTGACCGTGCGGCAGAAAGGCAAC
AAGGTGGTTAAACCCGACGAGACACGGGTCAAGCAGTTCCTGGAAGGTTTCAACATCGAAACCTTCGAGATGGTCGGCAC
ACTGTCCAACGCCCAGGGTACCTTCGCCTTGGTGAAGGGCGCAGGTGGCGTGCATCGGGTGAGGGTCGGGGACTACCTGG
GACGCAACGACGGCAAGGTCGTCGGCATCAGCGAAGGAAAAATAGACGTGATTGAAATCGTTCCTGACGGAGAGGGGAAC
TGGCTGGAGCGTCCGCGCAGCCTGACTCTCAAGGAACGCTCCTGA
ATGAGAGCCCGCCTGATTCTGAGCAGCTTGCTGCTCACCATGCTTGCCGGTTGCGGCGCGAATTCCGAGTTCGGCGATCT
TCAAGCCTATATGAACGAGGTACGTGCTCGACCTAAGGGCAATATCGAGCCTCTGCCGAAGTTTCAGCCATATGAAGCTT
TTACTTATAGCGCTTCGAACCTGCGTAGTCCGTTCCAGCCGCCGGTGAAGATCGACCTGACCGTGCGGCAGAAAGGCAAC
AAGGTGGTTAAACCCGACGAGACACGGGTCAAGCAGTTCCTGGAAGGTTTCAACATCGAAACCTTCGAGATGGTCGGCAC
ACTGTCCAACGCCCAGGGTACCTTCGCCTTGGTGAAGGGCGCAGGTGGCGTGCATCGGGTGAGGGTCGGGGACTACCTGG
GACGCAACGACGGCAAGGTCGTCGGCATCAGCGAAGGAAAAATAGACGTGATTGAAATCGTTCCTGACGGAGAGGGGAAC
TGGCTGGAGCGTCCGCGCAGCCTGACTCTCAAGGAACGCTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comL/pilP | Acinetobacter baylyi ADP1 |
36.628 |
98.851 |
0.362 |