Detailed information NTG0282603

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: DA787_RS13985
• Genome accession: NZ_CP033205
• Coordinates: 2671220..2672485 (+)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis strain MBI 600
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2666220..2677485

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DA787_RS13965 (DA787_13950)	yrrB	2667591..2668211 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
DA787_RS13970 (DA787_13955)	mnmA	2668297..2669412 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
DA787_RS13975 (DA787_13960)	iscSA	2669443..2670582 (-)	1140	WP_003246057.1	cysteine desulfurase family protein	-
DA787_RS13980 (DA787_13965)	cymR	2670601..2671017 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
DA787_RS13985 (DA787_13970)	rarA	2671220..2672485 (+)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
DA787_RS13990 (DA787_13975)	tcdA	2672527..2673291 (-)	765	WP_009967893.1	tRNA threonylcarbamoyladenosine dehydratase	-
DA787_RS14000 (DA787_13985)	aspS	2673627..2675405 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
DA787_RS14005 (DA787_13990)	hisS	2675419..2676693 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
DA787_RS14010 (DA787_13995)	yrzK	2677075..2677245 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=282603 DA787_RS13985 WP_004398500.1 2671220..2672485(+) (rarA) [Bacillus subtilis strain MBI 600]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=282603 DA787_RS13985 WP_004398500.1 2671220..2672485(+) (rarA) [Bacillus subtilis strain MBI 600]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1