Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   C9J79_RS00390 Genome accession   NZ_CP028185
Coordinates   76882..77397 (-) Length   171 a.a.
NCBI ID   WP_002799196.1    Uniprot ID   Q0P8R6
Organism   Campylobacter jejuni strain CFSAN054107     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 71882..82397
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9J79_RS00375 (C9J79_00380) - 71993..73810 (-) 1818 WP_107131154.1 motility associated factor glycosyltransferase family protein -
  C9J79_RS00380 (C9J79_00385) - 73807..75630 (-) 1824 WP_107131155.1 motility associated factor glycosyltransferase family protein -
  C9J79_RS00385 (C9J79_00390) - 75640..76882 (-) 1243 Protein_73 DUF2920 family protein -
  C9J79_RS00390 (C9J79_00395) ctsG 76882..77397 (-) 516 WP_002799196.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  C9J79_RS00395 (C9J79_00400) tsaD 77398..78405 (-) 1008 WP_002884179.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  C9J79_RS00400 (C9J79_00405) - 78402..79796 (-) 1395 WP_070310227.1 M99 family carboxypeptidase catalytic domain-containing protein -
  C9J79_RS00405 (C9J79_00410) dxr 79798..80868 (-) 1071 WP_002859634.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  C9J79_RS00410 (C9J79_00415) cdsA 80865..81590 (-) 726 WP_002859635.1 phosphatidate cytidylyltransferase -
  C9J79_RS00415 (C9J79_00420) - 81599..81937 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18678.56 Da        Isoelectric Point: 6.4682

>NTDB_id=282096 C9J79_RS00390 WP_002799196.1 76882..77397(-) (ctsG) [Campylobacter jejuni strain CFSAN054107]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=282096 C9J79_RS00390 WP_002799196.1 76882..77397(-) (ctsG) [Campylobacter jejuni strain CFSAN054107]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCTGCTATTGCTTTACCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATCAACGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCGTAGGTGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0P8R6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

94.152

100

0.942

Multiple sequence alignment