Detailed information NTG0280977

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: D4H71_RS01835
• Genome accession: NZ_CP032910
• Coordinates: 360255..361028 (-)
• Length: 257 a.a.
• NCBI ID: WP_139547922.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 20-A-EK1
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 355255..366028

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4H71_RS01800	-	355487..356647 (+)	1161	WP_139547916.1	HP1165 family MFS efflux transporter	-
D4H71_RS01805	-	356654..357628 (-)	975	WP_139547917.1	NAD(P)/FAD-dependent oxidoreductase	-
D4H71_RS01810	ccoS	357654..357845 (-)	192	WP_001090949.1	cbb3-type cytochrome oxidase assembly protein CcoS	-
D4H71_RS01815	-	357969..358550 (+)	582	WP_201736987.1	DedA family protein	-
D4H71_RS01820	-	358642..359136 (+)	495	WP_139547919.1	flavodoxin	-
D4H71_RS01825	ybeY	359190..359612 (+)	423	WP_139547920.1	rRNA maturation RNase YbeY	-
D4H71_RS01830	-	359701..360228 (-)	528	WP_139547921.1	Fic family protein	-
D4H71_RS01835	proC	360255..361028 (-)	774	WP_139547922.1	pyrroline-5-carboxylate reductase	Machinery gene
D4H71_RS01840	hopL	361041..364733 (-)	3693	WP_139547923.1	Hop family outer membrane protein HopL	-

Sequence

Protein

• Length: 257 a.a.
• Molecular weight: 28198.86 Da
• Isoelectric Point: 8.6055

>NTDB_id=280977 D4H71_RS01835 WP_139547922.1 360255..361028(-) (proC) [Helicobacter pylori strain 20-A-EK1]
MEILQFIGYGNMAQAILEGAHETLSKRFILEITGRNPEKIAPFLQEKNIQAQIVPYKDAIDIHQKFVFLLFKPYNLKDFN
YQGQAKSVLSALAGVSFKALNNAINSLHYLKCMPNIASKFALSSTAVCEKSVVPSISEKALNIIESFGNCVRVGNEEQVD
ASIATNGSALAFLSLVASGLKDAGIREGLNARDSLELVEMSFKGFAKLLEKERPEMIIEQICTPKGATIEGLSVLEKKGV
RGAFIKACHESVKKMRL

Nucleotide

• Length: 774 bp

>NTDB_id=280977 D4H71_RS01835 WP_139547922.1 360255..361028(-) (proC) [Helicobacter pylori strain 20-A-EK1]
ATGGAAATCTTACAATTCATCGGCTATGGGAATATGGCTCAAGCGATTTTAGAAGGCGCTCATGAAACTTTATCCAAGCG
TTTTATTTTAGAAATTACCGGGCGAAACCCTGAAAAAATCGCCCCTTTTTTACAAGAAAAAAACATTCAAGCTCAAATCG
TGCCTTACAAAGACGCTATTGACATACACCAAAAATTCGTGTTTTTACTTTTTAAGCCTTACAACCTTAAGGATTTTAAT
TATCAAGGGCAAGCTAAAAGCGTTTTGAGCGCTTTAGCTGGCGTGAGTTTTAAAGCTTTAAATAATGCGATTAATTCTTT
ACATTACTTAAAATGCATGCCCAATATCGCGAGCAAGTTCGCCCTTTCTTCTACGGCGGTGTGCGAAAAATCGGTTGTGC
CTTCAATAAGCGAGAAAGCTTTGAATATTATTGAGAGTTTTGGGAATTGCGTGCGAGTGGGTAATGAAGAGCAGGTGGAT
GCCAGTATAGCGACCAATGGGAGCGCACTCGCTTTTTTAAGCTTGGTAGCGAGCGGTTTGAAAGACGCCGGTATTAGAGA
GGGCTTGAACGCTAGAGATTCTTTGGAATTGGTGGAAATGAGTTTTAAAGGCTTTGCCAAGCTGTTAGAAAAAGAACGCC
CTGAGATGATCATAGAGCAAATTTGCACCCCTAAAGGCGCAACGATTGAAGGCTTGAGCGTTTTAGAAAAAAAGGGGGTT
AGAGGAGCGTTTATAAAAGCATGCCATGAAAGCGTGAAAAAAATGCGCCTCTAA

Domains

Predicted by InterProScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-94)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (156-255)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	36.614	98.833	0.362