Detailed information NTG0280886

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: C7J89_RS07810
• Genome accession: NZ_CP027846
• Coordinates: 1567693..1570089 (+)
• Length: 798 a.a.
• NCBI ID: WP_103294718.1
• Uniprot ID: -
• Organism: Staphylococcus kloosii strain ATCC 43959
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1562693..1575089

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7J89_RS07790 (C7J89_07785)	sal	1562875..1564509 (+)	1635	WP_103294715.1	Sal family ABC-F type ribosomal protection protein	-
C7J89_RS07795 (C7J89_07790)	-	1564574..1565713 (+)	1140	WP_061854520.1	cysteine desulfurase family protein	-
C7J89_RS07800 (C7J89_07795)	mnmA	1565717..1566829 (+)	1113	WP_103294716.1	tRNA 2-thiouridine(34) synthase MnmA	-
C7J89_RS07805 (C7J89_07800)	-	1567011..1567688 (+)	678	WP_103294717.1	lipopolysaccharide assembly protein LapB	-
C7J89_RS07810 (C7J89_07805)	recD2	1567693..1570089 (+)	2397	WP_103294718.1	ATP-dependent RecD-like DNA helicase	Machinery gene
C7J89_RS07815 (C7J89_07810)	alaS	1570394..1573024 (+)	2631	WP_103294719.1	alanine--tRNA ligase	-
C7J89_RS07820 (C7J89_07815)	-	1573090..1573353 (+)	264	WP_061854525.1	IreB family regulatory phosphoprotein	-
C7J89_RS07825 (C7J89_07820)	ruvX	1573356..1573784 (+)	429	WP_103294720.1	Holliday junction resolvase RuvX	-
C7J89_RS07830 (C7J89_07825)	-	1573801..1574133 (+)	333	WP_103294721.1	DUF1292 domain-containing protein	-
C7J89_RS07835 (C7J89_07830)	-	1574421..1575056 (+)	636	WP_103296133.1	O-methyltransferase	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 89956.25 Da
• Isoelectric Point: 4.4929

>NTDB_id=280886 C7J89_RS07810 WP_103294718.1 1567693..1570089(+) (recD2) [Staphylococcus kloosii strain ATCC 43959]
MADSTLFNYSMVKGTVDAILFQNKDNFYTVLKVDTIESNETFDSMPTVVGFFPEVVEGDVYTFKGQVATHPKYGKQLKAE
TFEKELPQTKEAIVSYLSSDLFKGIGKKTAQNIVNALGENTISDILNDATVLEKVPGLPKKKQQQIAEQIASNQETERII
IRLHDLGFGPKLAMNIYQTYLGETLNVIEKSPYQLVYDVKGIGFNKADVLAKNIGIQYNDPERIKAGILYLLEEECIKQG
HTYLPSQFLIDNVQDMLSNPPAEEIERKQIEAQIDQLVNDSKLIQQEDQFAIPSLYYSEIKSVQNLYRNFTYTKKLKDIE
TSELLLEIGDIEDKNNVSYAESQREALQTAINSKVMLLTGGPGTGKTTVIKGIVELYAEIHGLSLDYDDYKEDDYPIVLG
APTGRASKRLSESTELEAMTIHRLIGWNQDTQPEDILDNEINAKLIIIDEMSMVDTWLFHQFMSAVPIDAQIVLVGDEDQ
LPSVGPGQVFKDLIDSKVIPRVNLTEVYRQQEGSSIIELAHRIKLNQHVDITQRFHDRNFINCSTEQIPEVVDKVVNSAV
SKGYDMSDIQVLAPMYKGSAGIKKLNSVLQGILNPKDKDTREIEFGEVLFRKGDKVLQLVNRPNDNIFNGDIGVIVGIFW
AKENALDKDVVVVDFEGNEITFTRQDLMELTHAYCTSIHKSQGSEFPIVIMPMVKQYYRMLQKPILYTGLTRAKQSLVFL
GDPQAFDLGLKTNGQVRMTQLCSLLQAYFNNDEDEAQADAKEVNNSFDASIELSETTIYKIDPMINMGQMSPYDFVND

Nucleotide

• Length: 2397 bp

>NTDB_id=280886 C7J89_RS07810 WP_103294718.1 1567693..1570089(+) (recD2) [Staphylococcus kloosii strain ATCC 43959]
ATGGCTGATTCTACACTGTTTAACTATTCAATGGTTAAAGGCACAGTTGACGCAATTCTATTTCAAAATAAAGATAACTT
TTATACTGTGTTAAAAGTCGATACAATTGAATCAAATGAAACCTTTGATAGTATGCCGACAGTTGTAGGATTTTTCCCTG
AAGTGGTTGAAGGTGATGTTTATACTTTCAAAGGACAAGTCGCTACGCATCCCAAATATGGTAAACAACTAAAGGCCGAA
ACATTCGAAAAAGAGTTACCTCAAACAAAAGAAGCCATCGTCAGTTATCTTTCTAGTGATCTATTTAAAGGAATTGGTAA
AAAAACTGCTCAAAATATTGTAAACGCCCTAGGTGAAAATACAATTTCAGATATTTTAAATGATGCAACAGTACTTGAAA
AAGTGCCTGGCTTACCTAAGAAAAAACAACAACAAATTGCCGAACAAATCGCGAGTAATCAAGAAACTGAGCGAATTATC
ATTCGACTGCATGACTTAGGTTTCGGTCCTAAGTTAGCCATGAATATTTACCAAACATATCTCGGTGAAACTTTAAATGT
AATTGAGAAGAGTCCGTATCAACTTGTTTATGATGTAAAAGGTATTGGTTTCAATAAGGCAGATGTATTAGCTAAAAATA
TTGGTATTCAATATAATGATCCTGAACGTATTAAAGCAGGTATTCTATATTTACTAGAAGAAGAATGTATTAAACAAGGT
CATACTTATTTACCAAGCCAATTTTTAATAGATAACGTCCAGGATATGTTATCAAATCCACCAGCTGAAGAGATAGAAAG
AAAGCAAATTGAAGCGCAAATCGATCAACTCGTGAATGATAGTAAATTAATACAACAAGAAGATCAGTTCGCTATTCCAA
GTTTATATTACTCAGAAATTAAAAGTGTGCAAAATTTATATCGTAATTTCACATATACAAAGAAATTAAAAGATATAGAA
ACTTCAGAATTATTGTTAGAAATTGGAGATATTGAAGATAAGAACAATGTCAGCTATGCCGAATCTCAAAGAGAAGCTTT
ACAAACGGCTATTAATTCTAAAGTAATGTTATTAACAGGTGGACCTGGTACAGGTAAAACTACTGTTATAAAAGGTATTG
TAGAATTATATGCTGAAATTCATGGCTTATCGTTAGATTATGATGATTATAAGGAAGATGATTATCCAATTGTATTAGGA
GCACCAACGGGTCGAGCTTCTAAAAGATTATCTGAGTCGACAGAACTTGAAGCCATGACGATTCATCGGTTAATTGGGTG
GAATCAAGATACACAGCCAGAAGATATATTGGATAATGAAATTAATGCGAAATTAATCATTATCGATGAAATGTCTATGG
TCGATACGTGGTTGTTCCATCAATTTATGAGCGCCGTGCCAATCGATGCTCAAATTGTATTGGTGGGGGACGAAGACCAA
TTACCATCTGTAGGACCAGGACAAGTCTTTAAAGATTTAATTGATTCTAAAGTAATTCCTAGAGTAAATCTTACTGAAGT
TTATCGACAACAAGAAGGTTCAAGTATTATTGAGTTAGCACATCGTATCAAATTAAATCAACATGTTGATATTACGCAAC
GCTTTCACGATAGAAACTTTATAAATTGTTCTACAGAACAAATTCCTGAAGTCGTTGATAAGGTAGTTAATAGTGCAGTT
TCAAAAGGATATGATATGAGTGATATCCAAGTGCTAGCTCCGATGTATAAAGGTTCAGCAGGTATTAAAAAATTAAATTC
AGTATTGCAAGGTATTTTGAACCCTAAGGATAAAGACACTAGAGAAATCGAATTTGGAGAAGTACTGTTTCGTAAAGGCG
ATAAAGTATTACAACTGGTCAATCGCCCAAATGATAATATTTTTAATGGCGATATAGGTGTTATAGTTGGCATATTTTGG
GCGAAAGAAAATGCGTTAGATAAAGATGTCGTAGTTGTAGATTTTGAAGGCAATGAAATTACATTTACGAGACAGGATTT
AATGGAATTGACACATGCATATTGTACGTCTATTCATAAATCTCAAGGTTCTGAATTTCCGATTGTTATTATGCCTATGG
TCAAACAATATTATAGAATGTTGCAGAAGCCTATCTTATATACTGGTTTAACTAGAGCTAAACAATCTTTAGTCTTTTTA
GGCGATCCACAAGCCTTTGATTTAGGTTTGAAAACGAACGGGCAAGTTAGAATGACGCAACTTTGTTCATTATTACAAGC
TTACTTTAACAATGATGAAGATGAAGCACAAGCTGACGCAAAAGAAGTTAACAATAGTTTTGATGCATCTATAGAATTAA
GCGAAACAACAATATATAAAATAGATCCCATGATAAATATGGGACAAATGTCGCCTTATGACTTCGTTAATGATTGA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-719)

• Helix-hairpin-helix domain (HHH_5) (103-149)

• AAA domain (AAA_30) (339-545)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	50	99.499	0.497