Detailed information NTG0280682

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: D4K20_RS01845
• Genome accession: NZ_CP032903
• Coordinates: 365935..366708 (-)
• Length: 257 a.a.
• NCBI ID: WP_139544947.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 173-A-EK1
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 360935..371708

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4K20_RS01810	-	361006..362166 (+)	1161	WP_139544943.1	HP1165 family MFS efflux transporter	-
D4K20_RS01815	-	362173..363147 (-)	975	WP_139544944.1	NAD(P)/FAD-dependent oxidoreductase	-
D4K20_RS01820	ccoS	363172..363363 (-)	192	WP_001090949.1	cbb3-type cytochrome oxidase assembly protein CcoS	-
D4K20_RS01825	-	363485..364066 (+)	582	WP_139544945.1	DedA family protein	-
D4K20_RS01830	-	364157..364651 (+)	495	WP_120858137.1	flavodoxin	-
D4K20_RS01835	ybeY	364706..365128 (+)	423	WP_139544946.1	rRNA maturation RNase YbeY	-
D4K20_RS01840	-	365374..365907 (-)	534	WP_000549890.1	Fic/DOC family protein	-
D4K20_RS01845	proC	365935..366708 (-)	774	WP_139544947.1	pyrroline-5-carboxylate reductase	Machinery gene
D4K20_RS01850	hopL	366722..370435 (-)	3714	WP_139544948.1	Hop family outer membrane protein HopL	-

Sequence

Protein

• Length: 257 a.a.
• Molecular weight: 28176.88 Da
• Isoelectric Point: 8.3328

>NTDB_id=280682 D4K20_RS01845 WP_139544947.1 365935..366708(-) (proC) [Helicobacter pylori strain 173-A-EK1]
MEILQFIGYGNMAQAILEGAHEILSKRFILEVTGRNPEKIAPFLQEKNIQAQIVPYKDAIDIHQKFVFLLFKPYNLKDFN
YQGQAKSVLSALAGVGFKALNDAIDSLHYLKCMPNIASKFALSSTAVCEKSPMPLISQKALSIIESFGNCVRVGNEEQVD
ASIATNGSALAFLSLVASSLKDAGIREGLNARDSLELVEMSFKGFAKLLEKERPEVIIEQICTPKGATIEGLSVLEKKGV
RGAFIKACHESVKKIRL

Nucleotide

• Length: 774 bp

>NTDB_id=280682 D4K20_RS01845 WP_139544947.1 365935..366708(-) (proC) [Helicobacter pylori strain 173-A-EK1]
ATGGAAATCTTACAATTCATCGGCTATGGGAATATGGCTCAAGCGATTTTAGAAGGTGCTCATGAAATTTTATCCAAGCG
TTTCATTTTAGAGGTTACCGGGCGAAACCCTGAAAAAATCGCCCCTTTTTTACAAGAAAAAAACATTCAAGCTCAAATCG
TGCCTTACAAAGACGCTATTGATATACACCAAAAATTCGTGTTTTTACTTTTTAAGCCTTATAACCTTAAGGATTTTAAT
TATCAAGGGCAAGCTAAAAGCGTTTTGAGCGCACTAGCTGGTGTGGGTTTTAAAGCTTTAAATGATGCGATAGATTCTTT
GCATTACTTAAAATGCATGCCTAACATTGCGAGCAAGTTCGCCCTTTCTTCTACGGCGGTGTGTGAAAAATCGCCCATGC
CCTTAATAAGCCAAAAGGCTTTGAGTATTATTGAGAGTTTTGGGAATTGCGTGCGAGTGGGCAATGAAGAGCAGGTGGAT
GCCAGTATAGCGACCAATGGGAGCGCGCTCGCTTTTTTAAGCTTGGTAGCGAGCAGTTTGAAAGACGCCGGTATTAGAGA
GGGCTTGAACGCTAGAGATTCTTTAGAATTGGTGGAAATGAGTTTTAAGGGTTTTGCCAAGCTGTTAGAAAAAGAACGCC
CTGAGGTGATTATAGAGCAAATTTGCACCCCTAAAGGCGCAACGATTGAAGGCTTGAGCGTTTTAGAAAAAAAGGGGGTT
AGGGGAGCGTTCATCAAAGCATGTCATGAGAGCGTGAAAAAAATACGCCTCTAA

Domains

Predicted by InterProScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-94)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (156-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	36.614	98.833	0.362