Detailed information NTG0280412

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: C7J90_RS09660
• Genome accession: NZ_CP027770
• Coordinates: 2057451..2059847 (-)
• Length: 798 a.a.
• NCBI ID: WP_103209987.1
• Uniprot ID: -
• Organism: Staphylococcus felis strain ATCC 49168
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2052451..2064847

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7J90_RS09640 (C7J90_09640)	-	2053380..2053694 (-)	315	WP_103209980.1	DUF1292 domain-containing protein	-
C7J90_RS09645 (C7J90_09645)	ruvX	2053708..2054136 (-)	429	WP_103209982.1	Holliday junction resolvase RuvX	-
C7J90_RS09650 (C7J90_09650)	-	2054129..2054401 (-)	273	WP_103209984.1	IreB family regulatory phosphoprotein	-
C7J90_RS09655 (C7J90_09655)	alaS	2054574..2057204 (-)	2631	WP_103209986.1	alanine--tRNA ligase	-
C7J90_RS09660 (C7J90_09660)	recD2	2057451..2059847 (-)	2397	WP_103209987.1	ATP-dependent RecD-like DNA helicase	Machinery gene
C7J90_RS09665 (C7J90_09665)	-	2059852..2060526 (-)	675	WP_103209989.1	tetratricopeptide repeat protein	-
C7J90_RS09670 (C7J90_09670)	mnmA	2060579..2061691 (-)	1113	WP_103209990.1	tRNA 2-thiouridine(34) synthase MnmA	-
C7J90_RS09675 (C7J90_09675)	-	2061688..2062833 (-)	1146	WP_103209992.1	cysteine desulfurase family protein	-
C7J90_RS09680 (C7J90_09680)	-	2063106..2064131 (+)	1026	WP_103209993.1	LLM class flavin-dependent oxidoreductase	-
C7J90_RS11995	-	2064308..2064463 (-)	156	WP_167388997.1	hypothetical protein	-
C7J90_RS09685 (C7J90_09685)	-	2064463..2064663 (-)	201	WP_103209995.1	CsbD family protein	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 90437.04 Da
• Isoelectric Point: 4.6036

>NTDB_id=280412 C7J90_RS09660 WP_103209987.1 2057451..2059847(-) (recD2) [Staphylococcus felis strain ATCC 49168]
MENPTLLDSTYIKGNIEFILFQNSENFYTVLKVEVLESNGDFGDMATVVGFFPDIVEDETYIFHGHIVLHPRYGQQLKAE
TFQKEIPQTKDAVIAYLSSDLFKGIGKKTAESIVNTIGEDAITQILRDESVLSDVPKLSKAKQQQIAELITQNRESEQIM
IRLNELGFGAKLSMDIYQYYKADTIRIVENNPYQLVFDIRGVGFQKADQLALQLGIAPTNQDRLKAGLLYLIEEICIKQG
HTYLPESTLINEAVQLLSKNQNITIETTQIKETLTFLYEEKKLINFEENVSLPSLYYSELKSTQNLFKILSNVEMISKFD
DSDIQLQIGQIEEQNHVYYAPSQKDALENAMKHKVMLLTGGPGTGKTTVIKGIVQLYAELHGLSLDYNDYEEDEFPIALA
APTGRASKRLYESTGLEATTIHRLIGWSQETKPDDILDYEISAKLIIIDEMSMVDTWLFHQFLSAVPIDAQVILVGDEDQ
LPSVGPGQVFKDLIDTGVLPRINLTEVFRQQDGSSIIELAHRMKTGLNVDITERYHDRSFIPCHAEQIPSVVDKVVKNAV
KKGYTMSDIQVLAPMYRGSAGIKKLNEVLQNILNPKHDDEHREIDFGEVKFRKGDKVLQLVNRPNDNIFNGDIGEIVGIF
WAKENDLNKDVVVVDFEGNEITFIRSDLIELTHAYCTSIHKAQGSEFPIVIMPIVKQYFRMLQKPILYTGLTRAKQSLVF
LGEAEAFNIGLTTEGQTRLTYLATFLRQYFNDTDDIRESETSNDHQSIVLTEDTISKIDPMINMAKITPYDFLEIDKV

Nucleotide

• Length: 2397 bp

>NTDB_id=280412 C7J90_RS09660 WP_103209987.1 2057451..2059847(-) (recD2) [Staphylococcus felis strain ATCC 49168]
GTGGAAAACCCAACATTATTAGATAGCACATATATCAAAGGGAATATCGAATTTATTTTATTTCAAAATAGCGAAAACTT
TTACACTGTTTTAAAAGTGGAAGTTCTTGAGTCAAATGGCGATTTCGGTGATATGGCTACGGTTGTTGGGTTTTTTCCAG
ACATCGTGGAAGACGAAACGTATATATTTCATGGTCATATCGTATTACATCCTCGATACGGCCAACAACTTAAAGCTGAG
ACATTTCAAAAGGAAATCCCTCAAACAAAAGATGCTGTTATTGCTTATTTATCAAGCGATTTATTCAAAGGGATAGGTAA
AAAAACAGCAGAATCAATCGTAAATACAATTGGTGAAGACGCTATTACCCAAATATTAAGAGATGAATCTGTTCTATCGG
ATGTTCCTAAATTATCTAAAGCAAAGCAACAACAAATTGCTGAACTGATTACCCAAAATCGGGAAAGCGAACAAATAATG
ATTCGCCTAAATGAACTAGGTTTCGGTGCAAAGTTATCAATGGATATTTATCAATATTATAAAGCTGACACCATCCGAAT
CGTTGAAAATAATCCGTATCAATTGGTTTTTGATATCCGAGGTGTAGGGTTTCAAAAAGCTGATCAACTTGCATTACAAC
TTGGTATAGCACCAACGAATCAAGATCGTTTGAAAGCTGGATTGCTTTATTTAATTGAAGAAATATGTATTAAACAAGGT
CATACATATCTACCTGAATCAACTCTTATCAATGAAGCGGTACAGTTATTGTCCAAAAATCAAAATATAACGATTGAAAC
AACACAAATTAAAGAAACTTTGACATTCTTATACGAAGAAAAAAAGTTAATCAACTTTGAAGAAAATGTGTCGTTACCGA
GCCTCTATTATTCTGAACTAAAAAGTACTCAAAACTTATTTAAAATTTTGAGCAATGTTGAAATGATTTCAAAATTTGAC
GATTCGGACATTCAATTACAAATTGGTCAAATCGAGGAACAAAATCATGTATACTATGCCCCTTCTCAAAAAGATGCATT
AGAAAATGCAATGAAACACAAAGTCATGTTATTAACAGGTGGGCCAGGAACAGGAAAGACTACTGTAATTAAAGGGATTG
TTCAATTATATGCAGAATTACACGGTTTATCTTTAGATTATAATGATTATGAAGAGGATGAGTTTCCGATTGCACTTGCT
GCACCGACTGGCCGTGCCTCTAAACGACTTTATGAATCTACAGGTCTTGAAGCAACTACCATTCACCGCCTTATTGGTTG
GAGTCAAGAAACAAAGCCAGACGATATTTTAGATTATGAAATCAGTGCAAAGCTTATTATTATTGATGAGATGTCAATGG
TAGATACATGGTTGTTTCATCAATTTTTATCAGCTGTGCCAATAGATGCTCAAGTGATACTTGTAGGTGATGAAGATCAA
CTCCCATCAGTTGGTCCTGGTCAAGTGTTTAAAGATTTAATTGATACAGGTGTACTACCTAGAATTAACTTAACTGAAGT
CTTCAGACAACAAGATGGTTCGAGCATTATTGAATTAGCACATCGTATGAAAACAGGACTTAACGTTGACATTACTGAAA
GATATCATGATCGCTCGTTTATTCCATGTCATGCTGAACAAATTCCTAGTGTTGTTGATAAAGTTGTAAAAAATGCTGTC
AAAAAAGGATATACGATGTCAGATATTCAGGTGTTAGCTCCGATGTACCGTGGTAGTGCTGGGATAAAAAAATTAAATGA
AGTTTTACAAAATATATTAAACCCAAAACACGATGATGAACATCGTGAAATTGATTTTGGTGAAGTAAAGTTTCGTAAAG
GGGACAAAGTGTTACAACTTGTCAACAGGCCAAACGACAATATATTCAATGGAGATATTGGAGAGATTGTTGGTATTTTT
TGGGCAAAAGAAAATGATTTGAATAAAGATGTAGTCGTAGTAGATTTTGAAGGAAATGAAATTACATTCATACGATCAGA
TTTAATTGAACTGACACATGCTTATTGCACATCAATTCATAAAGCACAAGGATCAGAATTTCCAATTGTGATTATGCCTA
TAGTTAAGCAGTATTTTCGAATGTTACAAAAACCCATACTTTACACTGGTCTTACACGCGCAAAGCAATCGCTTGTCTTT
TTAGGTGAAGCGGAGGCGTTTAACATAGGATTAACGACAGAAGGACAAACAAGGTTAACGTACTTGGCAACGTTTTTACG
ACAGTATTTTAACGATACGGATGATATACGTGAATCCGAAACATCAAATGATCATCAATCTATTGTTTTAACAGAAGACA
CTATTTCTAAGATTGATCCTATGATTAATATGGCAAAGATAACACCATATGATTTTTTAGAAATTGACAAAGTTTAG

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (339-545)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-656)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-720)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.811	99.624	0.496