Detailed information NTG0279737

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: D9C17_RS04290
• Genome accession: NZ_CP032863
• Coordinates: 738138..739403 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain N2-2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 733138..744403

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C17_RS04270 (D9C17_04270)	yrrB	734509..735129 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
D9C17_RS04275 (D9C17_04275)	mnmA	735215..736330 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
D9C17_RS04280 (D9C17_04280)	iscSA	736361..737500 (-)	1140	WP_014480425.1	cysteine desulfurase family protein	-
D9C17_RS04285 (D9C17_04285)	cymR	737519..737935 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
D9C17_RS04290 (D9C17_04290)	rarA	738138..739403 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
D9C17_RS04295 (D9C17_04295)	tcdA	739443..740207 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
D9C17_RS04305 (D9C17_04305)	aspS	740542..742320 (-)	1779	WP_014480429.1	aspartate--tRNA ligase	-
D9C17_RS04310 (D9C17_04310)	hisS	742334..743608 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
D9C17_RS04315 (D9C17_04315)	yrzK	743990..744160 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=279737 D9C17_RS04290 WP_014480427.1 738138..739403(+) (rarA) [Bacillus subtilis subsp. subtilis strain N2-2]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=279737 D9C17_RS04290 WP_014480427.1 738138..739403(+) (rarA) [Bacillus subtilis subsp. subtilis strain N2-2]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993