Detailed information NTG0278572

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: DSM104627_RS03490
• Genome accession: NZ_CP027638
• Coordinates: 700014..700751 (-)
• Length: 245 a.a.
• NCBI ID: WP_002780246.1
• Uniprot ID: A0A5T1L8T6
• Organism: Campylobacter coli strain meC0467
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 695014..705751

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DSM104627_RS03450 (DSM104627_00703)	-	695127..695888 (+)	762	WP_072213627.1	ATP-binding protein	-
DSM104627_RS03455 (DSM104627_00704)	-	695885..696568 (+)	684	WP_002791740.1	3-methyladenine DNA glycosylase	-
DSM104627_RS03460 (DSM104627_00705)	thiD	696568..697380 (+)	813	WP_002786353.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
DSM104627_RS03465 (DSM104627_00706)	thiE	697370..698002 (+)	633	WP_002834515.1	thiamine phosphate synthase	-
DSM104627_RS03470 (DSM104627_00707)	-	697980..698609 (+)	630	WP_002777119.1	uroporphyrinogen-III synthase	-
DSM104627_RS03475 (DSM104627_00708)	-	698602..699054 (-)	453	WP_002777117.1	hypothetical protein	-
DSM104627_RS03480 (DSM104627_00709)	-	699051..699719 (-)	669	WP_002797569.1	hypothetical protein	-
DSM104627_RS03485 (DSM104627_00710)	-	699712..700017 (-)	306	WP_002790525.1	hypothetical protein	-
DSM104627_RS03490 (DSM104627_00711)	proC	700014..700751 (-)	738	WP_002780246.1	pyrroline-5-carboxylate reductase	Machinery gene
DSM104627_RS03495 (DSM104627_00712)	fliW	700751..701140 (-)	390	WP_002777093.1	flagellar assembly protein FliW	-
DSM104627_RS03500 (DSM104627_00713)	bamD	701304..701951 (+)	648	WP_002777091.1	outer membrane protein assembly factor BamD	-
DSM104627_RS03505 (DSM104627_00714)	lon	701967..704342 (+)	2376	WP_002783351.1	endopeptidase La	-
DSM104627_RS03510 (DSM104627_00715)	rpsR	704398..704658 (-)	261	WP_002777087.1	30S ribosomal protein S18	-
DSM104627_RS03515 (DSM104627_00716)	-	704669..705217 (-)	549	WP_002777084.1	single-stranded DNA-binding protein	-
DSM104627_RS03520 (DSM104627_00717)	rpsF	705226..705603 (-)	378	WP_002794143.1	30S ribosomal protein S6	-

Sequence

Protein

• Length: 245 a.a.
• Molecular weight: 26797.20 Da
• Isoelectric Point: 9.3032

>NTDB_id=278572 DSM104627_RS03490 WP_002780246.1 700014..700751(-) (proC) [Campylobacter coli strain meC0467]
MKADLYILANGAMAQALAYGLKDSYNIYIVGRNLEKLQILEKEGFKTLLYKDFNIENKNIILAFKPYALESVAANLKGKA
KILISVLANTDFDKLKLIQAQNYARIMPNTAAKYKASTTPYVLKNSNFKDEVIEILNTFGKAYELNEEKQMNAAMAISGC
APAFLALVAESIANAGVYEGLSKELSLNLTRSLFKSAAALLENEHPAIIKENICSPAGVTIKGIKVLEQKGIRGTFFEAL
NASAT

Nucleotide

• Length: 738 bp

>NTDB_id=278572 DSM104627_RS03490 WP_002780246.1 700014..700751(-) (proC) [Campylobacter coli strain meC0467]
ATGAAAGCTGATTTATATATACTTGCTAATGGTGCGATGGCGCAAGCTTTGGCTTATGGATTAAAAGATTCTTATAATAT
CTATATAGTCGGTAGAAATTTAGAAAAGCTTCAAATTTTAGAAAAAGAAGGTTTTAAAACTTTACTCTATAAAGATTTTA
ATATAGAAAATAAAAATATTATCTTAGCTTTTAAACCTTATGCCTTAGAAAGTGTCGCAGCAAATTTAAAAGGCAAGGCA
AAAATTTTAATTTCAGTTTTAGCCAATACGGATTTTGATAAATTAAAACTTATCCAAGCCCAAAATTATGCAAGGATAAT
GCCAAATACAGCAGCTAAATATAAAGCTTCCACAACTCCTTATGTTTTAAAAAATTCAAATTTTAAAGATGAAGTCATAG
AAATTTTAAATACTTTTGGCAAAGCTTATGAGTTAAACGAAGAAAAACAAATGAATGCTGCCATGGCTATAAGCGGTTGC
GCTCCTGCTTTTTTAGCATTAGTAGCTGAAAGCATTGCTAATGCTGGCGTGTATGAAGGATTATCAAAAGAGCTGAGTTT
AAATCTCACTCGTTCGCTTTTTAAAAGTGCTGCAGCCTTGCTAGAAAACGAGCACCCAGCCATCATTAAGGAAAATATCT
GCTCGCCTGCAGGTGTTACCATAAAAGGGATTAAAGTATTAGAGCAAAAAGGTATCCGTGGGACTTTTTTTGAGGCTCTT
AATGCTAGTGCAACATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (7-88)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (148-244)

3D structure

• AlphaFold DB: A0A5T1L8T6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	80.833	97.959	0.792