Detailed information NTG0278454

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AM481_RS14795
• Genome accession: NZ_CP027607
• Coordinates: 3074431..3075132 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain AR_0102
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3069431..3080132

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AM481_RS14765 (AM481_14765)	-	3069737..3070180 (-)	444	WP_001246675.1	SRPBCC family protein	-
AM481_RS14770 (AM481_14770)	tadA	3070250..3070753 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
AM481_RS14775 (AM481_14775)	-	3070760..3071884 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AM481_RS14780 (AM481_14780)	ung	3071881..3072594 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
AM481_RS14785 (AM481_14785)	-	3072645..3073241 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
AM481_RS14790 (AM481_14790)	gspK	3073472..3074431 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
AM481_RS14795 (AM481_14795)	xcpW	3074431..3075132 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AM481_RS14800 (AM481_14800)	xcpV	3075132..3075512 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
AM481_RS14805 (AM481_14805)	-	3075502..3076056 (-)	555	WP_000841373.1	type II secretion system protein	-
AM481_RS14810 (AM481_14810)	-	3076066..3076674 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AM481_RS14815 (AM481_14815)	-	3076712..3077485 (-)	774	WP_000497298.1	TatD family hydrolase	-
AM481_RS14820 (AM481_14820)	-	3077503..3077844 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
AM481_RS14825 (AM481_14825)	-	3077856..3078836 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
AM481_RS14830 (AM481_14830)	kdsB	3078848..3079609 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=278454 AM481_RS14795 WP_000594589.1 3074431..3075132(-) (xcpW) [Acinetobacter baumannii strain AR_0102]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=278454 AM481_RS14795 WP_000594589.1 3074431..3075132(-) (xcpW) [Acinetobacter baumannii strain AR_0102]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996