Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | AM481_RS05820 | Genome accession | NZ_CP027607 |
| Coordinates | 1219104..1219664 (+) | Length | 186 a.a. |
| NCBI ID | WP_085916952.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain AR_0102 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1214104..1224664
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM481_RS05795 (AM481_05795) | - | 1216246..1216375 (-) | 130 | Protein_1100 | hypothetical protein | - |
| AM481_RS05800 (AM481_05800) | rpoZ | 1216414..1216692 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| AM481_RS05805 (AM481_05805) | gmk | 1216765..1217394 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| AM481_RS05810 (AM481_05810) | ispH | 1217517..1218467 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| AM481_RS05815 (AM481_05815) | fimU | 1218637..1219110 (+) | 474 | WP_001214061.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| AM481_RS05820 (AM481_05820) | pilV | 1219104..1219664 (+) | 561 | WP_085916952.1 | type IV pilus modification protein PilV | Machinery gene |
| AM481_RS05825 (AM481_05825) | pilW | 1219665..1220666 (+) | 1002 | WP_000079200.1 | PilW family protein | Machinery gene |
| AM481_RS05830 (AM481_05830) | pilX | 1220663..1221481 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 186 a.a. Molecular weight: 20190.13 Da Isoelectric Point: 8.2254
>NTDB_id=278440 AM481_RS05820 WP_085916952.1 1219104..1219664(+) (pilV) [Acinetobacter baumannii strain AR_0102]
MLMHHYKQKAQAGVGLLEVLVALILLAIGVLGYVALQLRAMDASSEALSKSQAILVMRGLAENIRTNSTQASQYPTFVRS
YSNYTSDTPAPTSCFNSLCTASQLAQFDAYQAARNANQLGMRITMSNCPGVTNTMVQQRQCLFVFWGRTAPVITTNGTNT
SVDVSSCMSNNGVYVNNSTCLMMEAY
MLMHHYKQKAQAGVGLLEVLVALILLAIGVLGYVALQLRAMDASSEALSKSQAILVMRGLAENIRTNSTQASQYPTFVRS
YSNYTSDTPAPTSCFNSLCTASQLAQFDAYQAARNANQLGMRITMSNCPGVTNTMVQQRQCLFVFWGRTAPVITTNGTNT
SVDVSSCMSNNGVYVNNSTCLMMEAY
Nucleotide
Download Length: 561 bp
>NTDB_id=278440 AM481_RS05820 WP_085916952.1 1219104..1219664(+) (pilV) [Acinetobacter baumannii strain AR_0102]
TTGTTAATGCATCACTATAAGCAAAAAGCCCAAGCTGGGGTGGGCTTACTCGAAGTTTTGGTTGCCTTAATTTTACTTGC
TATTGGAGTTTTAGGTTATGTTGCCTTGCAGCTAAGAGCTATGGATGCATCTTCAGAAGCATTAAGTAAATCTCAAGCCA
TTCTAGTGATGAGGGGATTAGCAGAAAATATCCGTACAAATAGTACTCAAGCTAGCCAGTATCCTACATTTGTGCGTAGT
TATAGCAACTATACATCTGATACTCCTGCACCCACGTCATGTTTTAACTCTCTATGTACTGCCTCCCAACTCGCTCAATT
TGATGCCTATCAAGCAGCTAGAAATGCTAATCAACTGGGTATGAGAATTACGATGTCAAATTGCCCTGGCGTTACAAATA
CAATGGTGCAACAACGCCAGTGCCTATTTGTCTTTTGGGGTAGAACTGCGCCAGTGATTACTACAAATGGAACAAATACT
AGTGTGGATGTTTCAAGTTGTATGAGTAATAACGGTGTTTACGTGAATAATTCAACTTGCTTAATGATGGAGGCATATTA
A
TTGTTAATGCATCACTATAAGCAAAAAGCCCAAGCTGGGGTGGGCTTACTCGAAGTTTTGGTTGCCTTAATTTTACTTGC
TATTGGAGTTTTAGGTTATGTTGCCTTGCAGCTAAGAGCTATGGATGCATCTTCAGAAGCATTAAGTAAATCTCAAGCCA
TTCTAGTGATGAGGGGATTAGCAGAAAATATCCGTACAAATAGTACTCAAGCTAGCCAGTATCCTACATTTGTGCGTAGT
TATAGCAACTATACATCTGATACTCCTGCACCCACGTCATGTTTTAACTCTCTATGTACTGCCTCCCAACTCGCTCAATT
TGATGCCTATCAAGCAGCTAGAAATGCTAATCAACTGGGTATGAGAATTACGATGTCAAATTGCCCTGGCGTTACAAATA
CAATGGTGCAACAACGCCAGTGCCTATTTGTCTTTTGGGGTAGAACTGCGCCAGTGATTACTACAAATGGAACAAATACT
AGTGTGGATGTTTCAAGTTGTATGAGTAATAACGGTGTTTACGTGAATAATTCAACTTGCTTAATGATGGAGGCATATTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Acinetobacter baumannii D1279779 |
99.462 |
100 |
0.995 |
| pilV | Acinetobacter baylyi ADP1 |
40.86 |
100 |
0.409 |