Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   D6022_RS24105 Genome accession   NZ_CP032538
Coordinates   341943..342221 (-) Length   92 a.a.
NCBI ID   WP_225852975.1    Uniprot ID   -
Organism   Bacillus licheniformis strain MT-B06     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 336943..347221
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D6022_RS01820 - 338172..339527 (+) 1356 WP_017474081.1 YjiH family protein -
  D6022_RS01830 ywcE 339951..340211 (+) 261 WP_003186174.1 spore morphogenesis/germination protein YwcE -
  D6022_RS01835 - 340259..341458 (-) 1200 WP_011198409.1 clostripain-related cysteine peptidase -
  D6022_RS01840 - 341476..341931 (-) 456 WP_003186178.1 GNAT family N-acetyltransferase -
  D6022_RS24105 rcrP 341943..342221 (-) 279 WP_225852975.1 ABC transporter ATP-binding protein Regulator
  D6022_RS01845 - 342194..343750 (-) 1557 WP_225852976.1 ABC transporter ATP-binding protein -
  D6022_RS01850 - 343744..345669 (-) 1926 WP_225852977.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 92 a.a.        Molecular weight: 10599.03 Da        Isoelectric Point: 4.8728

>NTDB_id=276700 D6022_RS24105 WP_225852975.1 341943..342221(-) (rcrP) [Bacillus licheniformis strain MT-B06]
MRDESADILIFDEPSSALDVFIEEEIFDKLQKLTQGKTVIIVSHRLSTARFADHIIFLEKGRVAEAGTHQELMKNQAQYA
ELYRLQAEKYAQ

Nucleotide


Download         Length: 279 bp        

>NTDB_id=276700 D6022_RS24105 WP_225852975.1 341943..342221(-) (rcrP) [Bacillus licheniformis strain MT-B06]
ATGCGTGATGAGTCTGCCGACATTTTAATATTTGATGAACCCTCTTCTGCGCTGGATGTATTTATTGAGGAAGAGATATT
TGATAAGCTGCAAAAGCTGACGCAGGGCAAAACAGTCATTATTGTCTCGCACCGGTTAAGCACGGCCCGTTTTGCCGACC
ACATCATCTTTTTAGAAAAAGGAAGGGTGGCGGAGGCCGGAACCCATCAAGAATTGATGAAAAATCAGGCACAGTACGCA
GAGCTTTATCGCCTGCAAGCTGAAAAATACGCGCAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

42.169

90.217

0.38