Detailed information NTG0276618

Bioinformatically predicted

Overview

• Name: pilE
• Type: Machinery gene
• Locus tag: C6I29_RS13190
• Genome accession: NZ_CP027365
• Coordinates: 2800807..2801250 (-)
• Length: 147 a.a.
• NCBI ID: WP_034669853.1
• Uniprot ID: -
• Organism: Acinetobacter radioresistens strain DSSKY-A-001
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2795807..2806250

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C6I29_RS13160	-	2796375..2797361 (+)	987	WP_017400866.1	esterase/lipase family protein	-
C6I29_RS13165	-	2797463..2798434 (+)	972	WP_034669855.1	lipase family alpha/beta hydrolase	-
C6I29_RS13170	rplS	2798495..2798869 (-)	375	WP_005024307.1	50S ribosomal protein L19	-
C6I29_RS13175	trmD	2799044..2799793 (-)	750	WP_005404606.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
C6I29_RS13180	rimM	2799837..2800385 (-)	549	WP_005404607.1	ribosome maturation factor RimM	-
C6I29_RS13185	rpsP	2800406..2800663 (-)	258	WP_005018185.1	30S ribosomal protein S16	-
C6I29_RS13190	pilE	2800807..2801250 (-)	444	WP_034669853.1	type IV pilin protein	Machinery gene
C6I29_RS13195	-	2801237..2801722 (-)	486	WP_373867495.1	pilin	-
C6I29_RS13200	-	2801787..2805707 (-)	3921	WP_034669852.1	PilC/PilY family type IV pilus protein	-

Sequence

Protein

• Length: 147 a.a.
• Molecular weight: 15934.17 Da
• Isoelectric Point: 9.6271

>NTDB_id=276618 C6I29_RS13190 WP_034669853.1 2800807..2801250(-) (pilE) [Acinetobacter radioresistens strain DSSKY-A-001]
MKVGKYNGFTLIEVMIVVAIIGILAAIAYPSYSQYIIRTKRTDAQSEMLQVAQRMQTYRAANNTFAGATINTVYGSSVIP
KQGTALYNLTFSPSPTTANEWTLIATPISSTSQANDGVICLNHQGQKFWVKGASACALSNTSNWDGR

Nucleotide

• Length: 444 bp

>NTDB_id=276618 C6I29_RS13190 WP_034669853.1 2800807..2801250(-) (pilE) [Acinetobacter radioresistens strain DSSKY-A-001]
ATGAAAGTTGGTAAATATAATGGTTTTACGCTTATAGAAGTTATGATTGTAGTAGCTATTATTGGAATTTTAGCAGCGAT
TGCCTATCCTTCTTATAGCCAATATATTATAAGAACCAAACGTACAGATGCACAAAGTGAAATGTTGCAAGTTGCACAGC
GTATGCAAACCTATAGAGCAGCTAATAATACGTTCGCTGGTGCTACAATAAATACAGTTTATGGAAGCAGCGTGATCCCG
AAACAGGGAACAGCGCTTTATAACTTAACTTTTAGTCCCTCCCCGACCACAGCAAATGAATGGACATTAATAGCGACACC
AATTAGCAGCACATCTCAGGCTAATGATGGGGTTATTTGTCTGAATCACCAAGGCCAAAAATTCTGGGTCAAAGGTGCCA
GTGCCTGTGCTTTATCTAATACCTCCAACTGGGACGGCCGCTAA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (30-120)

• Prokaryotic N-terminal methylation motif (N_methyl) (5-29)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilE	Acinetobacter baumannii D1279779	59.574	95.918	0.571
comF	Acinetobacter baylyi ADP1	53.901	95.918	0.517