Detailed information NTG0275064

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: C5695_RS13235
• Genome accession: NZ_CP027116
• Coordinates: 2536440..2538824 (-)
• Length: 794 a.a.
• NCBI ID: WP_117731124.1
• Uniprot ID: A0AAD0MMM7
• Organism: Bacillus pumilus strain 145
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2531440..2543824

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C5695_RS13200 (C5695_13255)	-	2532391..2533119 (+)	729	WP_117731120.1	amino acid ABC transporter ATP-binding protein	-
C5695_RS13205 (C5695_13260)	-	2533133..2533942 (+)	810	WP_117731121.1	transporter substrate-binding domain-containing protein	-
C5695_RS13210 (C5695_13265)	-	2534022..2534674 (+)	653	Protein_2571	amino acid ABC transporter permease	-
C5695_RS13215 (C5695_13270)	-	2534690..2535340 (+)	651	WP_117731122.1	amino acid ABC transporter permease	-
C5695_RS13220 (C5695_13275)	-	2535490..2535621 (-)	132	WP_003216198.1	YrzQ family protein	-
C5695_RS13225 (C5695_13280)	-	2535642..2535833 (-)	192	WP_003216308.1	hypothetical protein	-
C5695_RS13230 (C5695_13285)	-	2535847..2536305 (-)	459	WP_233230741.1	prc-barrel domain-containing protein	-
C5695_RS13235 (C5695_13290)	recD2	2536440..2538824 (-)	2385	WP_117731124.1	ATP-dependent RecD-like DNA helicase	Machinery gene
C5695_RS13240 (C5695_13295)	-	2538844..2539497 (-)	654	WP_117731125.1	tetratricopeptide repeat protein	-
C5695_RS13245 (C5695_13300)	mnmA	2539558..2540676 (-)	1119	WP_003216305.1	tRNA 2-thiouridine(34) synthase MnmA	-
C5695_RS13250 (C5695_13305)	-	2540772..2541914 (-)	1143	WP_117731126.1	cysteine desulfurase family protein	-
C5695_RS13255 (C5695_13310)	-	2541933..2542352 (-)	420	WP_117731127.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89098.65 Da
• Isoelectric Point: 5.3305

>NTDB_id=275064 C5695_RS13235 WP_117731124.1 2536440..2538824(-) (recD2) [Bacillus pumilus strain 145]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNEYKVTEMDVANQIIALGEGKEMIIEDERCYHPSLFYAEQSVAKRIQKIVSQTE
YAEQFPESEFLLALGNLEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAVPAVTLTDIYRQADGSSIVELAHEMKNGVLPRDITARSKDRSFIRCNADQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVFRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEEVMDAELAALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=275064 C5695_RS13235 WP_117731124.1 2536440..2538824(-) (recD2) [Bacillus pumilus strain 145]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACAGTTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAGACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAGGAAACTTACACCTTCTACGGCAAAGTCACAAGCCACCCCAAATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTACCGACAACAAAGCAAGGAATCATTCACTATCTCTCAAGTGATTTGTT
TGAGGGGATAGGAAAAAAGACGGCGGAAGAAATCGTGGGAAAGCTTGGCAATCAGACGCTTCATAAAATCATGCGTGATC
CGGCGGTTTTATATGACGTTCCGCGCTTATCAAAGAAGAAGGCAGATAAACTGGCGGCAGCGCTCCAGGAGCATCAAGGA
TTGGAACAAATCATGATTAGTCTAAATCAATATGGCTTTGGTCCGCAGCTCAGCATGAAGATATATCAAGTGTATGAGAG
TGAAACGCTGCAAAAAATTGAGGAAAATCCGTATCAGCTCGTCAAGGATGTTGAAGGAATCGGGTTTATTAAGGCGGATG
AGCTGGGCGCGAGAACCGGCATCTCAGGAAATGATCCAGAGCGAATCCGAGCAGCGTTGCTTTATACAGTTGAGACAGCC
AGTCTTCAGGACGGTCATACGTACATACAAACGAAAGATTTGATCGTCGAAACCCGTAAGCTCCTCAATCAGACAGGCAA
TGAGTACAAAGTGACAGAAATGGATGTTGCCAATCAGATCATTGCACTTGGAGAAGGGAAAGAGATGATCATTGAAGATG
AGCGCTGCTATCATCCGTCCTTATTTTATGCGGAACAAAGTGTTGCCAAACGTATACAAAAAATTGTCTCCCAAACGGAA
TATGCAGAACAATTTCCTGAATCGGAATTCCTGCTTGCTCTCGGGAACCTTGAGGAACGGCTCGGCGTTCAGTATGCACC
AACTCAAAAGGAAGCGATTCAAAAGGCACTTATGTCCCCGATGCTGCTTTTAACAGGCGGACCTGGTACAGGGAAGACAA
CAGTCATTAAAGGGATTGTCGAGCTTTACAGTGATCTTCACGGTGTATCCCTTGATCCGAGTGATTATAAAAAAGATGAA
TCCTTTCCATTTGTGCTTGCTGCGCCTACTGGACGGGCGGCTAAACGGATGACGGAATCAACGGGGCTTCCAGCTGTAAC
CATTCACAGGCTGCTGGGCTGGAACGGGTCAGAGGGCTTTTCGCATGATGAGGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTCGATATTTGGCTTGCCAATCATTTGTTTAAAGCGATTCCTGATCATATCCAAGTAATT
ATGGTGGGAGATGAACATCAACTTCCATCTGTTGGACCAGGCCAAGTATTAAGAGACCTGCTAGCCTCACAAGCCGTGCC
AGCTGTTACACTGACAGATATTTACCGCCAGGCAGACGGCTCCAGTATTGTTGAACTTGCGCATGAGATGAAAAATGGCG
TCCTGCCAAGAGATATAACTGCACGTTCAAAGGATCGATCCTTCATTCGATGCAATGCGGATCAAATGAAAGAAGTCATT
GAGAAAGTCGTCAGCAACGCTGCTCAAAAAGGCTATTCAGCAAAAGATATTCAAGTGCTTGCACCCATGTATAAAGGGAA
AGCGGGCATTAATGAGCTCAATAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAAGGCAGAGAAATCCCGTTTG
GTGATGTCGTATTCAGAACTGGGGATAAAGTGCTTCAGCTTGTGAATCAGCCGGAGAATAATATTTTTAACGGTGATATC
GGTGAAATTGTCTCCATTTTTTATGCGAAAGAAAACACGGAAAAAGAAGATATGGCTGTCATCTCCTTTGATGGGAATGA
AATCACCTTTACAAAAAAGGATTTTCATCAATTTACACATGCTTATTGTTGCTCCATCCACAAATCACAAGGAAGTGAGT
TTCCCATCGTTGTGCTGCCAGTCGTGAGAAGCTATTATCGAATGCTTAGGCGAAATCTGCTGTACACAGCCATTACTCGA
AGTAAAAAGTTTTTAATCCTGTGCGGCGAGGAATCAGCACTGGAGTGGGGCGTGAAAAACAATGAGGATTCTCTCAGACA
AACGTCCTTAACAATGCGGCTCGTTCAAACTGAGGAGGTCATGGATGCGGAGCTTGCAGCCCTTCAAAAAGAGCTTCCGT
TTAGCGTGCATGATGCAAATATTGGAATGGAAGGAATCACTCCATTTGATTTTATGCATGAATAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (345-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80.276	100	0.805