Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | RK68_RS12605 | Genome accession | NZ_CP026961 |
| Coordinates | 2342073..2342372 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain FDAARGOS_10 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2337073..2347372
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK68_RS12565 (RK68_12565) | - | 2337134..2337337 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| RK68_RS12570 (RK68_12570) | - | 2337334..2338320 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| RK68_RS12575 (RK68_12575) | - | 2338320..2338649 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| RK68_RS12580 (RK68_12580) | - | 2338646..2339269 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| RK68_RS12585 (RK68_12585) | comGA | 2339321..2340295 (+) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RK68_RS12590 (RK68_12590) | comGB | 2340267..2341337 (+) | 1071 | Protein_2336 | competence type IV pilus assembly protein ComGB | - |
| RK68_RS12595 (RK68_12595) | comGC | 2341351..2341662 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RK68_RS12600 (RK68_12600) | comGD | 2341640..2342086 (+) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| RK68_RS12605 (RK68_12605) | comGE | 2342073..2342372 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| RK68_RS12610 (RK68_12610) | comGF | 2342290..2342787 (+) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RK68_RS12615 (RK68_12615) | - | 2342884..2343030 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| RK68_RS12620 (RK68_12620) | - | 2343020..2343544 (+) | 525 | WP_001015117.1 | shikimate kinase | - |
| RK68_RS12625 (RK68_12625) | gcvT | 2343703..2344794 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| RK68_RS12630 (RK68_12630) | gcvPA | 2344814..2346160 (+) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=273943 RK68_RS12605 WP_000844413.1 2342073..2342372(+) (comGE) [Staphylococcus aureus strain FDAARGOS_10]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=273943 RK68_RS12605 WP_000844413.1 2342073..2342372(+) (comGE) [Staphylococcus aureus strain FDAARGOS_10]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |