Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AM435_RS11870 | Genome accession | NZ_CP026707 |
| Coordinates | 2188425..2188850 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain AR_0056 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2183425..2193850
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM435_RS11840 (AM435_11835) | - | 2183953..2184987 (+) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
| AM435_RS11845 (AM435_11840) | - | 2185102..2186043 (+) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| AM435_RS11850 (AM435_11845) | rplS | 2186096..2186464 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AM435_RS11855 (AM435_11850) | trmD | 2186673..2187413 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AM435_RS11860 (AM435_11855) | rimM | 2187459..2188007 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| AM435_RS11865 (AM435_11860) | rpsP | 2188027..2188278 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AM435_RS11870 (AM435_11865) | pilE | 2188425..2188850 (-) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| AM435_RS11875 (AM435_11870) | pilY2 | 2188847..2189329 (-) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| AM435_RS11880 (AM435_11875) | pilY1 | 2189342..2193196 (-) | 3855 | WP_000768970.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=271857 AM435_RS11870 WP_000788342.1 2188425..2188850(-) (pilE) [Acinetobacter baumannii strain AR_0056]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=271857 AM435_RS11870 WP_000788342.1 2188425..2188850(-) (pilE) [Acinetobacter baumannii strain AR_0056]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |