Detailed information NTG0269223

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: C3F22_RS05010
• Genome accession: NZ_CP026420
• Coordinates: 1008675..1009301 (+)
• Length: 208 a.a.
• NCBI ID: WP_104425954.1
• Uniprot ID: A0A2L0I431
• Organism: Acinetobacter sp. ACNIH1
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1003675..1014301

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C3F22_RS04975 (C3F22_04980)	kdsB	1003975..1004736 (+)	762	WP_104425952.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
C3F22_RS04980 (C3F22_04985)	-	1004751..1005731 (+)	981	WP_104425953.1	DNA polymerase III subunit delta' C-terminal domain-containing protein	-
C3F22_RS04985 (C3F22_04990)	-	1005749..1006090 (+)	342	WP_005236142.1	PilZ domain-containing protein	-
C3F22_RS04990 (C3F22_04995)	-	1006118..1006891 (+)	774	WP_004783999.1	TatD family hydrolase	-
C3F22_RS04995 (C3F22_05000)	-	1006932..1007537 (+)	606	WP_005236135.1	TetR/AcrR family transcriptional regulator	-
C3F22_RS05000 (C3F22_05005)	-	1007556..1008104 (+)	549	WP_034170572.1	pilus assembly FimT family protein	-
C3F22_RS05005 (C3F22_05010)	gspI	1008094..1008678 (+)	585	WP_171065451.1	type II secretion system minor pseudopilin GspI	-
C3F22_RS05010 (C3F22_05015)	xcpW	1008675..1009301 (+)	627	WP_104425954.1	type II secretion system minor pseudopilin GspJ	Machinery gene
C3F22_RS05015 (C3F22_05020)	gspK	1009316..1010287 (+)	972	WP_104425955.1	type II secretion system minor pseudopilin GspK	-
C3F22_RS05020 (C3F22_05025)	-	1010448..1011044 (+)	597	WP_104425956.1	6-pyruvoyl trahydropterin synthase family protein	-
C3F22_RS05025 (C3F22_05030)	ung	1011090..1011803 (+)	714	WP_104425957.1	uracil-DNA glycosylase	-
C3F22_RS05030 (C3F22_05035)	-	1011800..1012921 (+)	1122	WP_104425958.1	enoyl-CoA hydratase/isomerase family protein	-
C3F22_RS05035 (C3F22_05040)	tadA	1012928..1013443 (+)	516	WP_104425959.1	tRNA adenosine(34) deaminase TadA	-
C3F22_RS05040 (C3F22_05045)	-	1013506..1013940 (+)	435	WP_004783989.1	SRPBCC family protein	-

Sequence

Protein

• Length: 208 a.a.
• Molecular weight: 23992.30 Da
• Isoelectric Point: 4.6684

>NTDB_id=269223 C3F22_RS05010 WP_104425954.1 1008675..1009301(+) (xcpW) [Acinetobacter sp. ACNIH1]
MKSKGFTLVELLVAIAIFAVLSALGWKVFDYIIQTKDRNAVHEQRLSQLQDTYQQILRDTVQAVPLTANINGDIQPALVL
QNERFNFSKTGVTDPLEEGVSPDERVEYQYRADEQKLYRLKYRNLNQTGRDQPESSVLLSEVEQFQIVVLNPNEMTQWPD
SSLDLNQIEQKQRLPKGIKINLMVNGVSYEWIFSLLNTDFLLETQKLT

Nucleotide

• Length: 627 bp

>NTDB_id=269223 C3F22_RS05010 WP_104425954.1 1008675..1009301(+) (xcpW) [Acinetobacter sp. ACNIH1]
ATGAAGTCAAAGGGATTTACGCTGGTCGAACTACTGGTTGCTATTGCTATTTTCGCCGTACTGTCTGCTCTAGGCTGGAA
AGTATTTGATTATATTATACAAACCAAAGACCGTAATGCGGTGCATGAACAGCGCTTAAGTCAGTTGCAAGATACTTATC
AGCAGATCTTGCGTGATACTGTACAGGCGGTGCCTTTAACGGCCAATATTAATGGTGATATTCAGCCGGCACTGGTTTTG
CAAAACGAGCGTTTTAACTTTAGTAAGACTGGAGTCACCGATCCTCTGGAAGAGGGGGTTTCTCCAGATGAACGGGTTGA
ATATCAGTACCGAGCAGATGAACAAAAACTATATCGACTGAAATACCGGAATTTAAATCAGACTGGTCGTGATCAACCTG
AATCCAGTGTGTTGTTGTCCGAGGTTGAGCAGTTTCAGATCGTAGTGCTTAATCCGAATGAAATGACCCAATGGCCAGAC
TCATCTCTTGATTTAAATCAGATTGAGCAAAAACAACGTCTGCCCAAAGGCATTAAAATTAACTTAATGGTTAATGGGGT
CAGTTATGAGTGGATTTTCAGTTTATTGAATACAGATTTCCTGCTTGAAACCCAAAAGTTAACCTGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (2-24)

• Type II secretion system (T2SS), protein J (T2SSJ) (58-187)

3D structure

• AlphaFold DB: A0A2L0I431

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	60.199	96.635	0.582