Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | Aba810CP_RS01760 | Genome accession | NZ_CP026338 |
| Coordinates | 372240..372665 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain 810CP | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 367240..377665
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Aba810CP_RS01750 (Aba810CP_01750) | pilY1 | 367894..371748 (+) | 3855 | WP_000768966.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| Aba810CP_RS01755 (Aba810CP_01755) | pilY2 | 371761..372243 (+) | 483 | WP_001046417.1 | type IV pilin protein | Machinery gene |
| Aba810CP_RS01760 (Aba810CP_01760) | pilE | 372240..372665 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| Aba810CP_RS01765 (Aba810CP_01765) | rpsP | 372812..373063 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| Aba810CP_RS01770 (Aba810CP_01770) | rimM | 373083..373631 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| Aba810CP_RS01775 (Aba810CP_01775) | trmD | 373677..374417 (+) | 741 | WP_000464596.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| Aba810CP_RS01780 (Aba810CP_01780) | rplS | 374625..374993 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| Aba810CP_RS01785 (Aba810CP_01785) | - | 375046..375987 (-) | 942 | WP_085943440.1 | lipase family alpha/beta hydrolase | - |
| Aba810CP_RS01790 (Aba810CP_01790) | - | 376102..377136 (-) | 1035 | WP_001189451.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=268318 Aba810CP_RS01760 WP_000788342.1 372240..372665(+) (pilE) [Acinetobacter baumannii strain 810CP]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=268318 Aba810CP_RS01760 WP_000788342.1 372240..372665(+) (pilE) [Acinetobacter baumannii strain 810CP]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |