Detailed information NTG0267528

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: C0971_RS12995
• Genome accession: NZ_CP026143
• Coordinates: 2563767..2566133 (-)
• Length: 788 a.a.
• NCBI ID: WP_248891932.1
• Uniprot ID: -
• Organism: Bacillus methanolicus strain DFS2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2558767..2571133

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C0971_RS12980 (C0971_13045)	dtd	2560380..2560820 (-)	441	WP_004435972.1	D-aminoacyl-tRNA deacylase	-
C0971_RS12985 (C0971_13050)	-	2560832..2563027 (-)	2196	WP_004435976.1	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	-
C0971_RS12990 (C0971_13055)	-	2563264..2563776 (-)	513	WP_004435977.1	adenine phosphoribosyltransferase	-
C0971_RS12995 (C0971_13060)	recJ	2563767..2566133 (-)	2367	WP_248891932.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
C0971_RS13000 (C0971_13065)	-	2566280..2567179 (-)	900	WP_248891933.1	cation diffusion facilitator family transporter	-
C0971_RS13005 (C0971_13070)	secDF	2567295..2569562 (-)	2268	WP_248891934.1	protein translocase subunit SecDF	-
C0971_RS13010 (C0971_13075)	-	2569765..2570061 (-)	297	WP_248891935.1	post-transcriptional regulator	-

Sequence

Protein

• Length: 788 a.a.
• Molecular weight: 89330.91 Da
• Isoelectric Point: 6.0779

>NTDB_id=267528 C0971_RS12995 WP_248891932.1 2563767..2566133(-) (recJ) [Bacillus methanolicus strain DFS2]
MLKSKTRWVVRQSDRKKAEKLMQELNITPLVASLLVNRGIDTVESARYFLFPKDQSFHDPYLFKDMDKAVERIRLAIERQ
EPILIYGDYDADGVSSTSVMMMTLRDLGANVDFYIPNRFSEGYGPNEAAFRLAAKRGFKLIITVDTGISALHEANVASEL
GIDLIITDHHEPGPVLPKALAIIHPKLEDSTYPFRELAGVGVAFKLSHALYGHVPEHFLEIVAIGTIADLVPLKGENRLI
AYKGIQQLKATKNIGLQSLLKLSGIEPELIDEETIGFVIAPRLNAAGRLESAEPAVDLLLTDDQDKAEMLAKKIDLLNKE
RQELVNAITEEAIKEVESYYPPEENQVLVIGKEGWNSGVIGIVASRLVEKFYRPVIVFSFDTEKGLAKGSARSIDGFDLF
KNLSACRDILPHFGGHPMAAGMNLHLKDVDELRIRLNALAKEQLTEEDFIPKTYLDGKIELNDIHLTAIEQMQMLAPYGV
DNPKPKVLIENVNIAAIRKIGSDQSHLKITIESNGASLDGIGFGLGHYYEHISPFSKLSVIGELAINEWNNIRKPQVFLQ
DLAVQSWQLFDFRGLKRFDKLAELVPRENRKWIVFNEENVPKFKGILNDEICLITSCEDAIKMEVDGLNLVLADLPPSKK
ILEHLLAGKKPARIYAQFYKENSDFFSTMPTREHFKWFYAFLAKKGTFDLKRHGDDLAKYRGWTKETIEFMSQVFFELKF
VTINNGFITLEKNISKRDLSDSKTYQKKLAQFTLENDLLYSSFQQLKGWFDKLFQESVKNEEAMKEWI

Nucleotide

• Length: 2367 bp

>NTDB_id=267528 C0971_RS12995 WP_248891932.1 2563767..2566133(-) (recJ) [Bacillus methanolicus strain DFS2]
ATGTTAAAGTCAAAAACAAGGTGGGTTGTCCGCCAATCCGACCGGAAGAAAGCAGAAAAATTAATGCAAGAATTGAACAT
TACTCCCCTGGTAGCATCATTGCTAGTTAATCGCGGAATCGATACCGTGGAAAGTGCACGGTATTTTCTATTTCCAAAAG
ATCAGTCTTTTCATGATCCTTATTTATTTAAGGACATGGATAAAGCTGTAGAAAGGATTCGTCTGGCGATTGAAAGGCAA
GAGCCGATATTAATATATGGCGATTATGATGCTGATGGAGTCAGCAGTACTTCTGTGATGATGATGACATTAAGAGATTT
GGGTGCAAATGTTGACTTTTACATACCCAATCGTTTTTCTGAAGGATATGGTCCAAATGAAGCGGCTTTCAGACTGGCAG
CAAAAAGAGGGTTTAAGCTCATAATCACGGTTGATACAGGTATTTCTGCCCTTCATGAAGCAAACGTTGCCAGTGAACTT
GGAATCGATTTAATCATTACCGATCATCACGAACCAGGACCCGTACTTCCAAAAGCTTTGGCGATCATTCATCCAAAATT
GGAAGACAGTACATATCCATTTCGTGAATTAGCTGGTGTAGGAGTAGCTTTTAAGCTTTCCCACGCGCTTTATGGACATG
TGCCGGAACATTTTCTTGAAATTGTTGCAATTGGGACAATAGCAGACCTTGTTCCTCTTAAAGGAGAAAACCGCCTGATT
GCCTATAAAGGAATACAACAACTAAAGGCAACGAAAAACATCGGACTACAAAGTCTGTTAAAATTAAGCGGCATTGAACC
GGAATTGATTGATGAAGAAACGATCGGCTTTGTTATTGCACCGAGGCTCAATGCCGCCGGAAGGCTTGAAAGTGCAGAAC
CAGCAGTCGATTTATTATTGACTGATGATCAGGATAAAGCGGAAATGCTGGCGAAAAAAATCGACCTGTTAAATAAGGAA
CGGCAAGAGCTTGTTAATGCGATTACAGAAGAAGCTATAAAAGAAGTTGAAAGCTATTATCCGCCTGAAGAAAATCAAGT
TCTTGTTATTGGAAAAGAAGGCTGGAATTCCGGAGTGATTGGAATTGTTGCTTCAAGACTAGTTGAGAAGTTTTATAGAC
CTGTGATTGTTTTTAGTTTTGATACAGAAAAAGGGTTGGCTAAAGGATCTGCAAGAAGCATAGATGGTTTTGATTTGTTC
AAAAACCTTTCTGCATGCAGAGATATCTTGCCGCATTTTGGCGGCCATCCAATGGCAGCAGGAATGAATTTACATCTCAA
AGATGTGGATGAGCTTCGTATCAGACTTAATGCTCTGGCAAAAGAACAGTTGACAGAAGAAGATTTTATCCCGAAAACAT
ATTTGGATGGTAAAATAGAATTAAACGATATCCATTTAACCGCTATCGAACAAATGCAAATGCTTGCTCCTTACGGTGTG
GACAATCCGAAACCGAAAGTGCTGATCGAAAATGTAAATATCGCAGCCATTAGAAAAATCGGCTCGGACCAAAGCCATCT
GAAAATAACAATTGAAAGTAATGGAGCATCGCTTGATGGCATTGGTTTTGGGTTGGGACATTATTATGAACATATTTCCC
CTTTTTCCAAACTGTCGGTAATTGGAGAATTAGCCATTAATGAGTGGAACAATATTCGCAAACCGCAAGTTTTTCTTCAA
GATTTGGCTGTTCAATCATGGCAGCTGTTTGATTTTCGCGGTTTAAAGCGTTTTGACAAATTAGCAGAGCTTGTACCGCG
CGAAAATCGAAAATGGATCGTTTTTAACGAAGAAAACGTGCCAAAATTTAAAGGCATCCTAAATGATGAAATCTGTCTTA
TAACTTCGTGTGAAGATGCTATAAAAATGGAAGTTGACGGATTGAATCTCGTTTTGGCTGATCTGCCGCCATCCAAGAAA
ATCCTGGAACATCTTTTAGCCGGCAAAAAACCTGCCAGAATATATGCTCAATTTTATAAAGAAAACAGTGACTTTTTTAG
CACCATGCCGACGAGGGAACATTTCAAATGGTTTTATGCTTTTTTAGCAAAAAAAGGAACGTTCGATCTTAAACGCCATG
GGGACGATCTAGCTAAATACAGAGGCTGGACGAAAGAAACAATTGAATTTATGTCGCAGGTGTTTTTTGAACTGAAATTT
GTTACAATAAACAATGGTTTTATAACATTAGAAAAAAATATTAGCAAACGGGATCTATCAGATTCAAAAACTTACCAGAA
AAAGCTGGCGCAATTTACTCTGGAAAATGATTTATTATATTCATCGTTTCAGCAGTTAAAAGGCTGGTTCGACAAGCTCT
TCCAAGAGTCAGTGAAAAATGAGGAGGCAATGAAAGAATGGATTTAA

Domains

Predicted by InterproScan.

• DHHA1 domain (DHHA1) (317-438)

• DHH family (DHH) (83-226)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (568-770)

• RecJ OB domain (RecJ_OB) (456-561)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Bacillus subtilis subsp. subtilis str. 168	53.944	99.746	0.538