Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | RK63_RS13090 | Genome accession | NZ_CP026076 |
| Coordinates | 2494069..2494368 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain FDAARGOS_4 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2489069..2499368
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK63_RS13065 (RK63_013065) | gcvPA | 2490281..2491627 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| RK63_RS13070 (RK63_013070) | gcvT | 2491647..2492738 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| RK63_RS13075 (RK63_013075) | - | 2492897..2493421 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| RK63_RS13080 (RK63_013080) | - | 2493411..2493557 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| RK63_RS13085 (RK63_013085) | comGF | 2493654..2494151 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RK63_RS13090 (RK63_013090) | comGE | 2494069..2494368 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| RK63_RS13095 (RK63_013095) | comGD | 2494355..2494801 (-) | 447 | WP_001791635.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| RK63_RS13100 (RK63_013100) | comGC | 2494779..2495090 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RK63_RS13105 (RK63_013105) | comGB | 2495104..2496174 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| RK63_RS13110 (RK63_013110) | comGA | 2496146..2497120 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RK63_RS13115 (RK63_013115) | - | 2497172..2497795 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| RK63_RS13120 (RK63_013120) | - | 2497792..2498121 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| RK63_RS13125 (RK63_013125) | - | 2498121..2499107 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| RK63_RS13130 (RK63_013130) | - | 2499104..2499307 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=266735 RK63_RS13090 WP_000844413.1 2494069..2494368(-) (comGE) [Staphylococcus aureus strain FDAARGOS_4]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=266735 RK63_RS13090 WP_000844413.1 2494069..2494368(-) (comGE) [Staphylococcus aureus strain FDAARGOS_4]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |