Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | RK82_RS05105 | Genome accession | NZ_CP026068 |
| Coordinates | 1020421..1020720 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain FDAARGOS_24 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1015421..1025720
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK82_RS05080 (RK82_005080) | gcvPA | 1016633..1017979 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| RK82_RS05085 (RK82_005085) | gcvT | 1017999..1019090 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| RK82_RS05090 (RK82_005090) | - | 1019249..1019773 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| RK82_RS05095 (RK82_005095) | - | 1019763..1019909 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| RK82_RS05100 (RK82_005100) | comGF | 1020006..1020503 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RK82_RS05105 (RK82_005105) | comGE | 1020421..1020720 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| RK82_RS05110 (RK82_005110) | comGD | 1020707..1021153 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| RK82_RS05115 (RK82_005115) | comGC | 1021131..1021442 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RK82_RS05120 (RK82_005120) | comGB | 1021456..1022526 (-) | 1071 | Protein_969 | competence type IV pilus assembly protein ComGB | - |
| RK82_RS05125 (RK82_005125) | comGA | 1022498..1023472 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RK82_RS05130 (RK82_005130) | - | 1023524..1024147 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| RK82_RS05135 (RK82_005135) | - | 1024144..1024473 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| RK82_RS05140 (RK82_005140) | - | 1024473..1025459 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| RK82_RS05145 (RK82_005145) | - | 1025456..1025659 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=266430 RK82_RS05105 WP_000844413.1 1020421..1020720(-) (comGE) [Staphylococcus aureus strain FDAARGOS_24]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=266430 RK82_RS05105 WP_000844413.1 1020421..1020720(-) (comGE) [Staphylococcus aureus strain FDAARGOS_24]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |