Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | RK79_RS10835 | Genome accession | NZ_CP026067 |
| Coordinates | 2144135..2144434 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844415.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain FDAARGOS_21 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2139135..2149434
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK79_RS10810 (RK79_010810) | gcvPA | 2140347..2141693 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| RK79_RS10815 (RK79_010815) | gcvT | 2141713..2142804 (-) | 1092 | WP_000093354.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| RK79_RS10820 (RK79_010820) | - | 2142963..2143487 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| RK79_RS10825 (RK79_010825) | - | 2143477..2143623 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| RK79_RS10830 (RK79_010830) | comGF | 2143720..2144217 (-) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RK79_RS10835 (RK79_010835) | comGE | 2144135..2144434 (-) | 300 | WP_000844415.1 | hypothetical protein | Machinery gene |
| RK79_RS10840 (RK79_010840) | comGD | 2144421..2144867 (-) | 447 | WP_072357807.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| RK79_RS10845 (RK79_010845) | comGC | 2144845..2145156 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RK79_RS10850 (RK79_010850) | comGB | 2145170..2146240 (-) | 1071 | WP_000776413.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| RK79_RS10855 (RK79_010855) | comGA | 2146212..2147186 (-) | 975 | WP_000697222.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RK79_RS10860 (RK79_010860) | - | 2147238..2147861 (-) | 624 | WP_047213494.1 | MBL fold metallo-hydrolase | - |
| RK79_RS10865 (RK79_010865) | - | 2147858..2148187 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| RK79_RS10870 (RK79_010870) | - | 2148187..2149173 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| RK79_RS10875 (RK79_010875) | - | 2149170..2149373 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11135.28 Da Isoelectric Point: 9.9215
>NTDB_id=266393 RK79_RS10835 WP_000844415.1 2144135..2144434(-) (comGE) [Staphylococcus aureus strain FDAARGOS_21]
MKSYKCKGSFLIDSMAGFLLIVLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIVLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=266393 RK79_RS10835 WP_000844415.1 2144135..2144434(-) (comGE) [Staphylococcus aureus strain FDAARGOS_21]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGTATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGTATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |
| comGE | Staphylococcus aureus N315 |
97.98 |
100 |
0.98 |